RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 CEP70Q8NHQ1 597 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 FBXO27Q8NI29 283 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 METTL6Q8TCB7 284 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 TOE1Q96GM8 510 aaKnown RBP11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 CCDC28BQ9BUN5 200 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 ZDHHC5Q9C0B5 715 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 SLC32A1Q9H598 525 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 AKTIPQ9H8T0 292 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 FGF22Q9HCT0 170 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 WNT16Q9UBV4 365 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 KCNK6Q9Y257 313 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 RNF11Q9Y3C5 154 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 PCM1Q15154 2024 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 CHURC1-FNTBB4DL54 471 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 CACNB4O00305 520 aaPredicted RBP11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 OTCP00480 354 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 UROSP10746 265 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 ESRRAP11474 423 aaPredicted RBP11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 ACADLP28330 430 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 SLC6A12P48065 614 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 PKNOX1P55347 436 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 STARD6P59095 220 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 PFN3P60673 137 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 GRB7Q14451 532 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 CDKL4Q5MAI5 379 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 AP1ARQ63HQ0 302 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 FAM91A1Q658Y4 838 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 LARP4Q71RC2 724 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 MED8Q96G25 268 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 BMFQ96LC9 184 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 GPR174Q9BXC1 333 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 LRMDAQ9H2I8 198 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 OSGEPL1Q9H4B0 414 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 SGK2Q9HBY8 427 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 INTS7Q9NVH2 962 aaKnown RBP11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 STOX2Q9P2F5 926 aaPredicted RBP11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 GPSM3Q9Y4H4 160 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 ABCA7Q8IZY2 2146 aa11.87□□□□□ -0.51
SPTBN1-203ENST00000389980 LOC100653049A0A140TA62 436 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 FPGTO14772 594 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 ATP5HO75947 161 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 KRT34O76011 436 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 HNRNPA2B1P22626 353 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 IMPA1P29218 277 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 GNPDA1P46926 289 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 HNMTP50135 292 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 KLF10Q13118 480 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 NAE1Q13564 534 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 METTL21CQ5VZV1 264 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 METRNLQ641Q3 311 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 AGTRAPQ6RW13 159 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 RINLQ6ZS11 566 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 SYNPOQ8N3V7 929 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 OXR1Q8N573 874 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 OR5AR1Q8NGP9 310 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 OR2T11Q8NH01 316 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 ACTRT2Q8TDY3 377 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 FBXL8Q96CD0 374 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 TUBGCP3Q96CW5 907 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 TBC1D10AQ9BXI6 508 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 DPEP2Q9H4A9 486 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 POLG2Q9UHN1 485 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 PLAGL1Q9UM63 463 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 ASF1AQ9Y294 204 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 WDR37Q9Y2I8 494 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 ST14Q9Y5Y6 855 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 COPG1Q9Y678 874 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 TDRD6O60522 2096 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 GOLGA4Q13439 2230 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 IGHV4-34P06331 123 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 AOC1P19801 751 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 CLCNKAP51800 687 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 PRKG2Q13237 762 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 NAA25Q14CX7 972 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 PYCR3Q53H96 274 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 DUS1LQ6P1R4 473 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 IL27RAQ6UWB1 636 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 GCNT7Q6ZNI0 430 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 LRRC70Q7Z2Q7 622 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 RD3Q7Z3Z2 195 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 PDZD3Q86UT5 571 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 GALNT13Q8IUC8 556 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 TCAIMQ8N3R3 496 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 ASB12Q8WXK4 309 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 PDXPQ96GD0 296 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 ZNF385DQ9H6B1 395 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 TBC1D17Q9HA65 648 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 FARSBQ9NSD9 589 aaKnown RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 PNMA8BQ9ULN7 279 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 INVSQ9Y283 1065 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 ARHGEF17Q96PE2 2063 aaPredicted RBP11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 VPS13AQ96RL7 3174 aa11.86□□□□□ -0.51
SPTBN1-203ENST00000389980 MEI4A8MW99 385 aa11.85□□□□□ -0.51
SPTBN1-203ENST00000389980 UBDO15205 165 aa11.85□□□□□ -0.51
SPTBN1-203ENST00000389980 PRAMEF4O60810 478 aa11.85□□□□□ -0.51
SPTBN1-203ENST00000389980 PEX11AO75192 247 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms