RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ERP29P30040 261 aaKnown RBP14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 POU6F2P78424 691 aaPredicted RBP14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 BEX3Q00994 111 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 FAPQ12884 760 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 EFR3AQ14156 821 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 SDE2Q6IQ49 451 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 DPY19L3Q6ZPD9 716 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 BNIPLQ7Z465 357 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 IPMKQ8NFU5 416 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 OR2T12Q8NG77 320 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 OR52K2Q8NGK3 314 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 TMEM40Q8WWA1 233 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 SLC30A2Q9BRI3 323 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 DPEP3Q9H4B8 488 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 NUP50Q9UKX7 468 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 NEUROG3Q9Y4Z2 214 aa14.36□□□□□ -0.11
VPS9D1-201ENST00000389386 SLITRK5O94991 958 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 RPLP0P05388 317 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 CA5AP35218 305 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 NKX3-2P78367 333 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 PRKG2Q13237 762 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 PFKFB4Q16877 469 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 TIGD6Q17RP2 521 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ARMC4Q5T2S8 1044 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ARHGAP17Q68EM7 881 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 DNAJB3Q8WWF6 145 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 UBE2FQ969M7 185 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 NT5C3BQ969T7 300 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 FAM149B1Q96BN6 582 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 BARD1Q99728 777 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 VNN3Q9NY84 501 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 CACNG4Q9UBN1 327 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 TFECO14948 347 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 WBP4O75554 376 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 MTHFD2P13995 350 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 IL12RB1P42701 662 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 CD83Q01151 205 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 C5orf22Q49AR2 442 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 INTS6LQ5JSJ4 861 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 SYPL2Q5VXT5 272 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 RAB44Q7Z6P3 723 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ZNF548Q8NEK5 533 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 DEDD2Q8WXF8 326 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 NPY6RQ99463 290 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 FICDQ9BVA6 458 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 C1QTNF7Q9BXJ2 289 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 OR51E2Q9H255 320 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 NDRG4Q9ULP0 352 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 AAR2Q9Y312 384 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 MIA3Q5JRA6 1907 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 SLC12A8A0AV02 714 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 OR6C70A6NIJ9 312 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 M0QYT0 321 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ARNTLO00327 626 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ANKRD28O15084 1053 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 SEC22BO75396 215 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 RECQL5O94762 991 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ADORA2BP29275 332 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ADRA1BP35368 520 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 SEMA3BQ13214 749 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 XKR7Q5GH72 579 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 SHQ1Q6PI26 577 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 ZNF767PQ75MW2 155 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 DET1Q7L5Y6 550 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 PIM3Q86V86 326 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 PLCZ1Q86YW0 608 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 CCDC117Q8IWD4 279 aaPredicted RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 OR6B3Q8NGW1 331 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 TRNT1Q96Q11 434 aaKnown RBP14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 MMP28Q9H239 520 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 TNKS2Q9H2K2 1166 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 PIGVQ9NUD9 493 aa14.35□□□□□ -0.11
VPS9D1-201ENST00000389386 MYLKQ15746 1914 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 I6L893 689 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 ARHGEF9O43307 516 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 SMIM10L2AP0DMW4 78 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 SMIM10L2BP0DMW5 78 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 IFI30P13284 250 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 IGFBP6P24592 240 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 DAPP51397 102 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 TPI1P60174 286 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 ERVK-8P63133 956 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 PWP1Q13610 501 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 ATP6AP1LQ52LC2 224 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 TOR2AQ5JU69 321 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 TSPYL5Q86VY4 417 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 FLCNQ8NFG4 579 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 OR8J3Q8NGG0 315 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 C17orf62Q9BQA9 187 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 ABHD16BQ9H3Z7 469 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 RASSF1Q9NS23 344 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 TMEM45AQ9NWC5 275 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 MUTYHQ9UIF7 546 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 TMPRSS11EQ9UL52 423 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 ZSWIM8A7E2V4 1837 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 PLK4O00444 970 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 PDPK1O15530 556 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 CRCPO75575 148 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms