RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 APLP1P51693 650 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 TRIM40Q6P9F5 258 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 CCBE1Q6UXH8 406 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 LYSMD3Q7Z3D4 306 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 GOLGA7Q7Z5G4 137 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 CLEC14AQ86T13 490 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR8H1Q8NGG4 311 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SLC9A8Q9Y2E8 581 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PRKAB1Q9Y478 270 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PCDHGA8Q9Y5G5 932 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 KIF13AQ9H1H9 1805 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ADAMDEC1O15204 470 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 FUCA1P04066 466 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ALDOCP09972 364 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ENGP17813 658 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 NR4A2P43354 598 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 UGT2B15P54855 530 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 RAB25P57735 213 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 CHIT1Q13231 466 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 IL18Q14116 193 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 TAF1AQ15573 450 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 KLHL12Q53G59 568 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 TRIM48Q8IWZ4 208 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 LRRC17Q8N6Y2 441 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 C2orf49Q9BVC5 232 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SLAMF8Q9P0V8 285 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SNX7Q9UNH6 387 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 USP22Q9UPT9 525 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF510Q9Y2H8 683 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 CPQQ9Y646 472 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 MYH9P35579 1960 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 FABP12A6NFH5 140 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 NT5C1B-RDH14C9J2C7 533 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR1I1O60431 355 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 EEDO75530 441 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 HAPLN1P10915 354 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 PRPS2P11908 318 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 RPS24P62847 133 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 FCHO2Q0JRZ9 810 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 DSC3Q14574 896 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 CLCA4Q14CN2 919 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF517Q6ZMY9 492 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 GPC2Q8N158 579 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 KRTCAP2Q8N6L1 136 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 RDH12Q96NR8 316 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 EMILIN2Q9BXX0 1053 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 IRF2BPLQ9H1B7 796 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 MRM3Q9HC36 420 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 THUMPD1Q9NXG2 353 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 PTGFRNQ9P2B2 879 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 CORO2BQ9UQ03 480 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZFP37Q9Y6Q3 630 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 LOC730098B7Z3J9 87 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF195O14628 629 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 CPNE3O75131 537 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ANXA4P09525 319 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 NFKB2Q00653 900 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 SPCS2Q15005 226 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ALFQ53S48 1182 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 TAPT1Q6NXT6 567 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 CERS6Q6ZMG9 384 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 GOLM1Q8NBJ4 401 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR10G2Q8NGC3 310 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMEM203Q969S6 136 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF599Q96NL3 588 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 BEX2Q9BXY8 128 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZDHHC6Q9H6R6 413 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 CFL2Q9Y281 166 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF451Q9Y4E5 1061 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 CROCCQ5TZA2 2017 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 GLYATL1P3A0A0U1RQE8 302 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 SMIM30A4D0T7 59 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 FPR1P21462 350 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 TUBA1BP68363 451 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 GANABQ14697 944 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 TSTQ16762 297 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 HMBOX1Q6NT76 420 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 TUBA1AQ71U36 451 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 GALNT10Q86SR1 603 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 ALDH16A1Q8IZ83 802 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 MYO19Q96H55 970 aa12.87□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR6C70A6NIJ9 312 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 RFPL2O75678 378 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 TSPAN9O75954 239 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 CSF2P04141 144 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 TCEA1P23193 301 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 PPIBP23284 216 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 CSNK2BP67870 215 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZNF33AQ06730 810 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 POM121L1PQ3SYA9 428 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 SPATS1Q496A3 300 aa12.86□□□□□ -0.35
TRAPPC9-201ENST00000389328 KIAA1614Q5VZ46 1190 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms