RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CXCR2P25025 360 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 PRKCZQ05513 592 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 TOP3AQ13472 1001 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 E2F2Q14209 437 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 AP5B1Q2VPB7 878 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 C18orf21Q32NC0 220 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 C6orf136Q5SQH8 315 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 LAIR2Q6ISS4 152 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
SDC1-202ENST00000381150 TCAIMQ8N3R3 496 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 PIK3C3Q8NEB9 887 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 PROKR1Q8TCW9 393 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 SLC39A13Q96H72 371 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 AIG1Q9NVV5 245 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 ZNF451Q9Y4E5 1061 aa13.57□□□□□ -0.24
SDC1-202ENST00000381150 A0A1W2PQH9 124 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 SLC12A8A0AV02 714 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 TRIM64BA6NI03 449 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 WASH4PA8MWX3 477 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 TNFRSF10AO00220 468 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 CXCR6O00574 342 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 ZW10O43264 779 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 PRSS23O95084 383 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 EIF2S1P05198 315 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 CAPN1P07384 714 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 NAT1P18440 290 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 DGKEP52429 567 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 FCGRTP55899 365 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 CD83Q01151 205 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 EMX2Q04743 252 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 MBTPS1Q14703 1052 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 CLPPQ16740 277 aaPredicted RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 GDPD3Q7L5L3 318 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 DCP2Q8IU60 420 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 TRIM48Q8IWZ4 208 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 LINC01599Q8WXQ3 324 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 ZBTB18Q99592 522 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 IKZF5Q9H5V7 419 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 VWA8A3KMH1 1905 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 TMEM88BA6NKF7 163 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 E9PAM4 449 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 CPNE3O75131 537 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 ECI2O75521 394 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 PCMT1P22061 227 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 HMGCS1Q01581 520 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 DMC1Q14565 340 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 SLC39A12Q504Y0 691 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 CLLU1OSQ5K130 101 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 ATAD3CQ5T2N8 411 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 PIK3R6Q5UE93 754 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 CYP4Z1Q86W10 505 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 PHYKPLQ8IUZ5 450 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 PARP16Q8N5Y8 322 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 RTL3Q8N8U3 475 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 OR7G1Q8NGA0 311 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 FAM120BQ96EK7 910 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 TXNDC15Q96J42 360 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 C1orf74Q96LT6 269 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 PRKD2Q9BZL6 878 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 SP110Q9HB58 689 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 NECTIN3Q9NQS3 549 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 TREX1Q9NSU2 369 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 A0A0U1RQS6 177 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 ELOVL7A1L3X0 281 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 J3KR12 359 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 EEDO75530 441 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 S1PR4O95977 384 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 HMBSP08397 361 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 IHHQ14623 411 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 KANK2Q63ZY3 851 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 HORMAD1Q86X24 394 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 GALNT13Q8IUC8 556 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 NLGN4XQ8N0W4 816 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 AMER2Q8N7J2 671 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 STAG3L4Q8TBR4 150 aa13.56□□□□□ -0.24
SDC1-202ENST00000381150 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 PDP1Q9P0J1 537 aaPredicted RBP13.56□□□□□ -0.24
SDC1-202ENST00000381150 PRRC2BQ5JSZ5 2229 aaKnown RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 TYW5A2RUC4 315 aaKnown RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 CD3EAPO15446 510 aaKnown RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 MATN4O95460 622 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 VIPP01282 170 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 EFNA1P20827 205 aaPredicted RBP13.55□□□□□ -0.24
SDC1-202ENST00000381150 FAM189BP81408 668 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 UBE3AQ05086 875 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 SLC10A7Q0GE19 358 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 RIMKLAQ8IXN7 391 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 GPR21Q99679 349 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 RUBCNLQ9H714 662 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 SCML2Q9UQR0 700 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 ASB1Q9Y576 335 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 NDUFS3O75489 264 aa13.55□□□□□ -0.24
SDC1-202ENST00000381150 LRATO95237 230 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms