RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 SLC22A18Q96BI1 424 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 MTBPQ96DY7 904 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 NUDT22Q9BRQ3 303 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 DHRS4Q9BTZ2 278 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 TRIM54Q9BYV2 358 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 EPB41L4BQ9H329 900 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 CAB39LQ9H9S4 337 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 PARVBQ9HBI1 364 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 RRAGDQ9NQL2 400 aaPredicted RBP11.57□□□□□ -0.56
PCNA-201ENST00000379143 AKAP7Q9P0M2 348 aaPredicted RBP11.57□□□□□ -0.56
PCNA-201ENST00000379143 SPATA7Q9P0W8 599 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 PDP2Q9P2J9 529 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 LNPEPQ9UIQ6 1025 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 ICKQ9UPZ9 632 aa11.57□□□□□ -0.56
PCNA-201ENST00000379143 RUVBL2Q9Y230 463 aaKnown RBP11.57□□□□□ -0.56
PCNA-201ENST00000379143 MN1Q10571 1320 aaPredicted RBP11.57□□□□□ -0.56
PCNA-201ENST00000379143 DSPP15924 2871 aaKnown RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 RP1P56715 2156 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 ASXL3Q9C0F0 2248 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 ARHGEF33A8MVX0 844 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 C2orf74A8MZ97 194 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 MYO1CO00159 1063 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 HYAL3O43820 417 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 CSO75390 466 aaKnown RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 ERLIN1O75477 346 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 SNRPAP09012 282 aaKnown RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 ENO2P09104 434 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 HIST1H2AGP0C0S8 130 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 CCDC166P0CW27 439 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 HIST1H2ADP20671 130 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 TYK2P29597 1187 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 PKLRP30613 574 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 CSF2RBP32927 897 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 HSD17B3P37058 310 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 BDKRB1P46663 353 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 SERPINB8P50452 374 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 ATP6V0D1P61421 351 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 CFHR1Q03591 330 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 TARDBPQ13148 414 aaKnown RBP eCLIP11.56□□□□□ -0.56
PCNA-201ENST00000379143 EIF3IQ13347 325 aaKnown RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 ZNF460Q14592 562 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 TAF1BQ53T94 588 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 PHF19Q5T6S3 580 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 ANKS6Q68DC2 871 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 ADGRD1Q6QNK2 874 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 TMEM207Q6UWW9 146 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 TBC1D1Q86TI0 1168 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 RASGRP3Q8IV61 690 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 SLITRK4Q8IW52 837 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 MREGQ8N565 214 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 HMGCLL1Q8TB92 370 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 DCAKDQ8WVC6 231 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 JPH3Q8WXH2 748 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 LIN37Q96GY3 246 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 HIST1H2AHQ96KK5 128 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 HIST1H2AJQ99878 128 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 H2AFJQ9BTM1 129 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 SLC12A9Q9BXP2 914 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 DERL2Q9GZP9 239 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 PSMC3IPQ9P2W1 217 aaPredicted RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 TLK1Q9UKI8 766 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 NOVA2Q9UNW9 492 aaKnown RBP11.56□□□□□ -0.56
PCNA-201ENST00000379143 ACOT9Q9Y305 439 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 NEUROG3Q9Y4Z2 214 aa11.56□□□□□ -0.56
PCNA-201ENST00000379143 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 COL27A1Q8IZC6 1860 aaPredicted RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 PTPRBP23467 1997 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 A0A087X1B8 175 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 IGHV5-10-1A0A0J9YXX1 117 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 IQANK1A0A1B0GTG1 560 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 PIPSLA2A3N6 862 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 HMX2A2RU54 273 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 GSAPA4D1B5 854 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 BTN3A1O00481 513 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 HGSO14964 777 aaPredicted RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 CASC3O15234 703 aaKnown RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 PHGDHO43175 533 aaKnown RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 WISP3O95389 354 aaPredicted RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 NUDT17P0C025 328 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 ANKRD34CP0C6C1 535 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 TPBGLP0DKB5 382 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 THRAP10827 490 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 POLR2CP19387 275 aaPredicted RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 PDX1P52945 283 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 PGGT1BP53609 377 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 AP1S2P56377 157 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 BMPR2Q13873 1038 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 GRB7Q14451 532 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 KIR2DS3Q14952 304 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 IRGCQ6NXR0 463 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 ZNF574Q6ZN55 896 aaPredicted RBP11.55□□□□□ -0.56
PCNA-201ENST00000379143 CMC1Q7Z7K0 106 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 ADAMTSL2Q86TH1 951 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 ADGRF3Q8IZF5 1079 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 OR2L8Q8NGY9 312 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 ANKRD49Q8WVL7 239 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 ISL2Q96A47 359 aa11.55□□□□□ -0.56
PCNA-201ENST00000379143 UBXN10Q96LJ8 280 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms