RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 IDO1P14902 403 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 GLULP15104 373 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 IMPA1P29218 277 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 PPP2CBP62714 309 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 ERVK-8P63133 956 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 PPP2CAP67775 309 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 TBL3Q12788 808 aaKnown RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 MAPRE2Q15555 327 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 ATP6AP1LQ52LC2 224 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 TBC1D3GQ6DHY5 549 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 TBC1D3CQ6IPX1 549 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 FAM124AQ86V42 546 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 LRRTM4Q86VH4 590 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 AMZ2Q86W34 360 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 HORMAD1Q86X24 394 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 MYLK4Q86YV6 388 aaPredicted RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 TBC1D3Q8IZP1 549 aaPredicted RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 FBXO15Q8NCQ5 510 aaPredicted RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 FAM3CQ92520 227 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 C1orf50Q9BV19 199 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 OR52A5Q9H2C5 316 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 ZNHIT2Q9UHR6 403 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 FZD4Q9ULV1 537 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 SORBS2O94875 1100 aaKnown RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 FUCA1P04066 466 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 NDUFV2P19404 249 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 MAT2AP31153 395 aaKnown RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 IGFALSP35858 605 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 MRPL19P49406 292 aaKnown RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 PLOD1Q02809 727 aaPredicted RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 SKIV2LQ15477 1246 aaKnown RBP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 CPSF6Q16630 551 aaKnown RBP eCLIP16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 MAP7D1Q3KQU3 841 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 GGTA1PQ4G0N0 100 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 USP30Q70CQ3 517 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 KLHDC8AQ8IYD2 350 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 OXR1Q8N573 874 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 EFCAB3Q8N7B9 438 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 L3MBTL4Q8NA19 623 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 ATL1Q8WXF7 558 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 USP7Q93009 1102 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 PREBQ9HCU5 417 aa16.89■□□□□ 0.29
THUMPD2-201ENST00000378727 ULK1O75385 1050 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 PDE5AO76074 875 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 NAE1Q13564 534 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 REP15Q6BDI9 236 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 C16orf89Q6UX73 402 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 TRIM46Q7Z4K8 759 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 THOC6Q86W42 341 aaKnown RBP16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 FNDC5Q8NAU1 212 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 PPFIBP2Q8ND30 876 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 OR56A3Q8NH54 315 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 TEX37Q96LM6 180 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 OR4K3Q96R72 315 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 SLC25A23Q9BV35 468 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 ZDHHC5Q9C0B5 715 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 BRINP2Q9C0B6 783 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 FZD3Q9NPG1 666 aa16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 ZNF490Q9ULM2 529 aaPredicted RBP16.88■□□□□ 0.29
THUMPD2-201ENST00000378727 C9JVG2 144 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 DPP6P42658 865 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 ZFP36L2P47974 494 aaKnown RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 CCR3P51677 355 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 STX5Q13190 355 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 ART3Q13508 389 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 LRP8Q14114 963 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 NR6A1Q15406 480 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 SMAD2Q15796 467 aaKnown RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 FBXO43Q4G163 708 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 SGO1Q5FBB7 561 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 EOGTQ5NDL2 527 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 NET1Q7Z628 596 aaPredicted RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 PGAM4Q8N0Y7 254 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 MRPL1Q9BYD6 325 aaKnown RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 PHPT1Q9NRX4 125 aaPredicted RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 MMP17Q9ULZ9 603 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 MYCLP1P12525 358 aaPredicted RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 RGS19P49795 217 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 IRX1P78414 480 aaPredicted RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 HMGCS1Q01581 520 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 EMX2Q04743 252 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 RPS6KA2Q15349 733 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 AP5B1Q2VPB7 878 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 RFTN2Q52LD8 501 aaPredicted RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 KIAA1324Q6UXG2 1013 aaKnown RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 KBTBD6Q86V97 674 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 ZNF480Q8WV37 535 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 MED8Q96G25 268 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 WDR41Q9HAD4 459 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 SLC52A3Q9NQ40 469 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 SLC2A4RGQ9NR83 387 aa16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 DNMT3AQ9Y6K1 912 aaPredicted RBP16.87■□□□□ 0.29
THUMPD2-201ENST00000378727 GPR89AB7ZAQ6 455 aa16.86■□□□□ 0.29
THUMPD2-201ENST00000378727 NR5A2O00482 541 aa16.86■□□□□ 0.29
THUMPD2-201ENST00000378727 NRP2O60462 931 aa16.86■□□□□ 0.29
THUMPD2-201ENST00000378727 PDYNP01213 254 aa16.86■□□□□ 0.29
THUMPD2-201ENST00000378727 GPR89BP0CG08 455 aa16.86■□□□□ 0.29
THUMPD2-201ENST00000378727 CD22P20273 847 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms