RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 OTUD1Q5VV17 481 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 ISCA2Q86U28 154 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 OR2T34Q8NGX1 318 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 OR2T3Q8NH03 318 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 TSPAN6O43657 245 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 ABLIM3O94929 683 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 SLC6A2P23975 617 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 RPL34P49207 117 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 CLCN4P51793 760 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 DGKQP52824 942 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 MAPK12P53778 367 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 SLC7A9P82251 487 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 ARF5P84085 180 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 MTX3Q5HYI7 312 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 PERM1Q5SV97 790 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 OR4A15Q8NGL6 344 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 OR10A6Q8NH74 314 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 ROPN1LQ96C74 230 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 CEP44Q9C0F1 390 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 NDUFA13Q9P0J0 144 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 ATXN10Q9UBB4 475 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 RAB23Q9ULC3 237 aa13.88□□□□□ -0.19
SHROOM1-203ENST00000378679 LOC285095A0A1B0GVY8 99 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 H3BN98 237 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 SLC22A2O15244 555 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 F11P03951 625 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 HMGA1P17096 107 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 PPIBP23284 216 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 MTHFRP42898 656 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 BDKRB1P46663 353 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 TRPC1P48995 793 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 MTPNP58546 118 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 SLBPQ14493 270 aaKnown RBP eCLIP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 PPP1R3AQ16821 1122 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 CRTC1Q6UUV9 634 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 PARGQ86W56 976 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 TMCO5AQ8N6Q1 288 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 C10orf53Q8N6V4 93 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 PHOSPHO2Q8TCD6 241 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 USP7Q93009 1102 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 MCMBPQ9BTE3 642 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 KCNK6Q9Y257 313 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 COMMD3-BMI1R4GMX3 469 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 RP1L1Q8IWN7 2480 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 SAP18O00422 153 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 LIN7AO14910 233 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 MUSKO15146 869 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 TGFB1P01137 390 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 CEBPBP17676 345 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 FDXRP22570 491 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 SPINT3P49223 89 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 ACTR3P61158 418 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 UNC50Q53HI1 259 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 CCSAPQ6IQ19 270 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 GLB1L3Q8NCI6 653 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 CXXC1Q9P0U4 656 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 VPS29Q9UBQ0 182 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 MYRFQ9Y2G1 1151 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 RNF11Q9Y3C5 154 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 KIAA1217Q5T5P2 1943 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 A0A0G2JN53 185 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 CCDC189A1A4V9 331 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 ELOVL7A1L3X0 281 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 FAM149AA5PLN7 773 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 M0R3G1 203 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 ACRV1P26436 265 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 KCTD11Q693B1 232 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 BHLHB9Q6PI77 547 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 BNIPLQ7Z465 357 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 ACVR1CQ8NER5 493 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 EXOSC8Q96B26 276 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 MYRFLQ96LU7 910 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 P2RY13Q9BPV8 354 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 LIN28AQ9H9Z2 209 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 A0A1W2PP55 124 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 FAM234BA2RU67 622 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 DHRS4L1P0CG22 281 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 NCK1P16333 377 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 XRCC1P18887 633 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 ITGAXP20702 1163 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 HLA-FP30511 346 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 DIO3P55073 304 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 MRPL58Q14197 206 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 C9orf64Q5T6V5 341 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 PRR23CQ6ZRP0 262 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 TBC1D21Q8IYX1 336 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 CPXM2Q8N436 756 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 OR13J1Q8NGT2 312 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 CLIP3Q96DZ5 547 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 EFCAB11Q9BUY7 163 aa13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-203ENST00000378679 NPIPB15A6NHN6 443 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 SDHDO14521 159 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 GPR39O43194 453 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 AKT2P31751 481 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 RPL5P46777 297 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 LAPTM5Q13571 262 aa13.86□□□□□ -0.19
SHROOM1-203ENST00000378679 ADRM1Q16186 407 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms