RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 AAK1Q2M2I8 961 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 C4orf17Q53FE4 359 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TMEM236Q5W0B7 351 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TMC5Q6UXY8 1006 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 PARP16Q8N5Y8 322 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CCDC185Q8N715 623 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 EFHBQ8N7U6 833 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 MCPH1Q8NEM0 835 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CLEC4DQ8WXI8 215 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 L3HYPDHQ96EM0 354 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CCDC115Q96NT0 180 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 MRPL57Q9BQC6 102 aaKnown RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SNRNP25Q9BV90 132 aaKnown RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TOR3AQ9H497 397 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 RHOJQ9H4E5 214 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SDR39U1Q9NRG7 319 aaPredicted RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CCDC167Q9P0B6 97 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SRP68Q9UHB9 627 aaKnown RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 DNMT3LQ9UJW3 386 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TBC1D24Q9ULP9 559 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 ERVW-1Q9UQF0 538 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 COL11A1P12107 1806 aaPredicted RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 A0A1W2PPC4 97 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 FAM234BA2RU67 622 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 OR2A25A4D2G3 310 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 HMX3A6NHT5 357 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 FAM25AB3EWG3 89 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 FAM25CB3EWG5 89 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 FAM25GB3EWG6 89 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 PDHXO00330 501 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 AQP7O14520 342 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 UBFD1O14562 309 aaKnown RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TNPO2O14787 897 aaKnown RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 RAD51BO15315 384 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TSPAN3O60637 253 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 UGT2B17O75795 530 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SEC24AO95486 1093 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 PGK1P00558 417 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SLURP2P0DP57 97 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 ACADMP11310 421 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 ZNF30P17039 623 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CYP2F1P24903 491 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 ARNTP27540 789 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 RPIAP49247 311 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 ACOT2P49753 483 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CCR9P51686 369 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 UGT2B15P54855 530 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 NFIAQ12857 509 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 PITRM1Q5JRX3 1037 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TOR1AIP1Q5JTV8 583 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 KDM4DQ6B0I6 523 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CAPN13Q6MZZ7 669 aaPredicted RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SYCE2Q6PIF2 218 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 PRR23BQ6ZRT6 265 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CCDC190Q86UF4 302 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 RTN4RL1Q86UN2 441 aaPredicted RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 P2RY8Q86VZ1 359 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SP8Q8IXZ3 490 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SP7Q8TDD2 431 aaPredicted RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 LPAR1Q92633 364 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 NXPE3Q969Y0 559 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 PPP1R36Q96LQ0 422 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 ZDHHC15Q96MV8 337 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 KCTD14Q9BQ13 255 aaPredicted RBP6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TMEM246Q9BRR3 403 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CCDC32Q9BV29 185 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 CD244Q9BZW8 370 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 GABARAPL1Q9H0R8 117 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 GSTO2Q9H4Y5 243 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 TXNDC16Q9P2K2 825 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 POLLQ9UGP5 575 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 ZNF229Q9UJW7 825 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 SLC39A10Q9ULF5 831 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 AURKCQ9UQB9 309 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 EMC9Q9Y3B6 208 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 GPR45Q9Y5Y3 372 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 BACE2Q9Y5Z0 518 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 COL1A2P08123 1366 aa6.55□□□□□ -1.36
CDKAL1-202ENST00000378610 PHIPQ8WWQ0 1821 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 A0A0U1RQS6 177 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 LINC00854A0A1B0GVQ3 168 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 DDTLA6NHG4 134 aaPredicted RBP6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 CA12O43570 354 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 PRPSAP2O60256 369 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 FMO6PO60774 539 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 EEDO75530 441 aaKnown RBP6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 CDK14O94921 469 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 F9P00740 461 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 FGF4P08620 206 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 CYP2A7P20853 494 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 BMP8BP34820 402 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 ARL2P36404 184 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 GSK3BP49841 420 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 ACTR2P61160 394 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 VBP1P61758 197 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 MAP4K2Q12851 820 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 EIF2B5Q13144 721 aaKnown RBP6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 ZNF404Q494X3 552 aa6.54□□□□□ -1.36
CDKAL1-202ENST00000378610 XKR9Q5GH70 373 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms