RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 OR51B4Q9Y5P0 310 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 NPPAP01160 153 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 HNRNPCP07910 306 aaKnown RBP eCLIP15.87■□□□□ 0.137e-7■■■■□ 21.6
TRIM27-202ENST00000377199 ANXA5P08758 320 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 CCR7P32248 378 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 AP1S1P61966 158 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 LMAN2Q12907 356 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 PON2Q15165 354 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 ANKRD26P1Q6NSI1 321 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 RBM23Q86U06 439 aaKnown RBP15.87■□□□□ 0.13
TRIM27-202ENST00000377199 NXPE1Q8N323 547 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 BEND7Q8N7W2 519 aaPredicted RBP15.87■□□□□ 0.13
TRIM27-202ENST00000377199 ADAMTS19Q8TE59 1207 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 HMX1Q9NP08 348 aaPredicted RBP15.87■□□□□ 0.13
TRIM27-202ENST00000377199 FAM118AQ9NWS6 357 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 GPRC5BQ9NZH0 403 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 CFAP97Q9P2B7 532 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 ST14Q9Y5Y6 855 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 SLC28A1O00337 649 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 IFRD1O00458 451 aaPredicted RBP15.87■□□□□ 0.13
TRIM27-202ENST00000377199 XPNPEP2O43895 674 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 CLDN9O95484 217 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 COL6A1P12109 1028 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 PFKLP17858 780 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 GABRR2P28476 465 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 S100A3P33764 101 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 RPS14P62263 151 aaKnown RBP15.87■□□□□ 0.13
TRIM27-202ENST00000377199 SLC14A1Q13336 389 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 SIM2Q14190 667 aaPredicted RBP15.87■□□□□ 0.13
TRIM27-202ENST00000377199 SPATS1Q496A3 300 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 CES5AQ6NT32 575 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 VRK3Q8IV63 474 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 CMTM8Q8IZV2 173 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 DCAF4L2Q8NA75 395 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 CNIH3Q8TBE1 160 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 TMEM169Q96HH4 297 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 ATP13A3Q9H7F0 1226 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 SLC22A14Q9Y267 594 aa15.87■□□□□ 0.13
TRIM27-202ENST00000377199 THSD7BQ9C0I4 1608 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 CREG1O75629 220 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 UGT2B4P06133 528 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 HALP42357 657 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 GSSP48637 474 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 ZNF648Q5T619 568 aaPredicted RBP15.86■□□□□ 0.13
TRIM27-202ENST00000377199 BROXQ5VW32 411 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 OR4F3Q6IEY1 312 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 HS6ST3Q8IZP7 471 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 SNX19Q92543 992 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 ALG14Q96F25 216 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 ZNF639Q9UID6 485 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 DYTNA2CJ06 578 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 PABPN1LA6NDY0 278 aaKnown RBP15.86■□□□□ 0.13
TRIM27-202ENST00000377199 hCG_2039718K7EN88 272 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 LSM3P62310 102 aaKnown RBP15.86■□□□□ 0.13
TRIM27-202ENST00000377199 IL5RAQ01344 420 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 CTU2Q2VPK5 515 aaKnown RBP15.86■□□□□ 0.13
TRIM27-202ENST00000377199 TTLL9Q3SXZ7 439 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 DUS1LQ6P1R4 473 aaKnown RBP15.86■□□□□ 0.13
TRIM27-202ENST00000377199 ZNF773Q6PK81 442 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 DOK6Q6PKX4 331 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 CRTC1Q6UUV9 634 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 SERPINA13PQ6UXR4 307 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 MICU2Q8IYU8 434 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 FOXJ1Q92949 421 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 APIPQ96GX9 242 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 COPS8Q99627 209 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 BARD1Q99728 777 aaKnown RBP15.86■□□□□ 0.13
TRIM27-202ENST00000377199 DNAJB9Q9UBS3 223 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 PDE10AQ9Y233 779 aa15.86■□□□□ 0.13
TRIM27-202ENST00000377199 KRT6AP02538 564 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 FTH1P02794 183 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 KRT6BP04259 564 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 IL6P05231 212 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 C7P10643 843 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 CD9P21926 228 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 PSMA3P25788 255 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 KRT6CP48668 564 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 ATP1A4Q13733 1029 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 ZXDCQ2QGD7 858 aaPredicted RBP15.85■□□□□ 0.13
TRIM27-202ENST00000377199 PTCHD3Q3KNS1 767 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 TBC1D25Q3MII6 688 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 C16orf87Q6PH81 154 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 MBOAT4Q96T53 435 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 CLMPQ9H6B4 373 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 PLGRKTQ9HBL7 147 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 ABCB8Q9NUT2 735 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 SH3BP1Q9Y3L3 701 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 HOXA2O43364 376 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 EBLN1P0CF75 366 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 CCNA2P20248 432 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 FSHRP23945 695 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 DCKP27707 260 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 SERPINA4P29622 427 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 MRPL19P49406 292 aaKnown RBP15.85■□□□□ 0.13
TRIM27-202ENST00000377199 CASP9P55211 416 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 CD47Q08722 323 aa15.85■□□□□ 0.13
TRIM27-202ENST00000377199 MAD2L1Q13257 205 aaPredicted RBP15.85■□□□□ 0.13
TRIM27-202ENST00000377199 TSTA3Q13630 321 aaPredicted RBP15.85■□□□□ 0.13
TRIM27-202ENST00000377199 USP39Q53GS9 565 aaKnown RBP15.85■□□□□ 0.13
TRIM27-202ENST00000377199 ALDH16A1Q8IZ83 802 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms