RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SGSHP51688 502 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 EPS8Q12929 822 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SPCS2Q15005 226 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PABPC1LQ4VXU2 614 aaKnown RBP14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HMGN2P46Q86SG4 172 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TSPAN33Q86UF1 283 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TERB1Q8NA31 727 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CD200R1Q8TD46 325 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MAL2Q969L2 176 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TTPALQ9BTX7 342 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CRISPLD1Q9H336 500 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF385DQ9H6B1 395 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 C1orf109Q9NX04 203 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RHCGQ9UBD6 479 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RGS17Q9UGC6 210 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RAB23Q9ULC3 237 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ADAM12O43184 909 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 AP1G1O43747 822 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ABCB7O75027 752 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CLDN9O95484 217 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TGFBR1P36897 503 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HLCSP50747 726 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF33AQ06730 810 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MAD2L1Q13257 205 aaPredicted RBP14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GATAD2AQ86YP4 633 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PACRGLQ8N7B6 248 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MAP4K5Q9Y4K4 846 aa14.07□□□□□ -0.16
TNFRSF1B-201ENST00000376259 A0A1B0GVM2 712 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RBM47A0AV96 593 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZNF99A8MXY4 864 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 C5orf58C9J3I9 102 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PSMD11O00231 422 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 STK19P49842 368 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CD300CQ08708 224 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CYHR1Q6ZMK1 362 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RHNO1Q9BSD3 238 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RBM38Q9H0Z9 239 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 AASDHPPTQ9NRN7 309 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NLE1Q9NVX2 485 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PCDHGA11Q9Y5H2 935 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RGS10O43665 173 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 BCAS1O75363 584 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PFKLP17858 780 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 HRH2P25021 359 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GTF2E2P29084 291 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ATP6V1E1P36543 226 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MAGEA10P43363 369 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 INPP1P49441 399 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CYP4F8P98187 520 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SPIBQ01892 262 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CACNG1Q06432 222 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PTCHD3Q3KNS1 767 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 USP39Q53GS9 565 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NADSYN1Q6IA69 706 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 BTLAQ7Z6A9 289 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SLC22A16Q86VW1 577 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZFAND4Q86XD8 727 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SETD9Q8NE22 299 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ABHD11Q8NFV4 315 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TRIB2Q92519 343 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PSKH2Q96QS6 385 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 IKZF5Q9H5V7 419 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NUDT4Q9NZJ9 180 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ZIM2Q9NZV7 527 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CNOT11Q9UKZ1 510 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PCDHA9Q9Y5H5 950 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 FUOMA2VDF0 154 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 LCKP06239 509 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ENGP17813 658 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TACR1P25103 407 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ALDH3B2P48448 385 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RPL34P49207 117 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CDH12P55289 794 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PON2Q15165 354 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TAB1Q15750 504 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TAS1R1Q7RTX1 841 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 RHEBL1Q8TAI7 183 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NDNFQ8TB73 568 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SCAMP4Q969E2 229 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 ACDQ96AP0 544 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 KCNS3Q9BQ31 491 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NUSAP1Q9BXS6 441 aaKnown RBP14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 NUAK2Q9H093 628 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PALMDQ9NP74 551 aa14.06□□□□□ -0.16
TNFRSF1B-201ENST00000376259 A8MV72 311 aaPredicted RBP14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CLIC1O00299 241 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SCAMP1O15126 338 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 COCHO43405 550 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 SMAD6O43541 496 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TULP3O75386 442 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 EEDO75530 441 aaKnown RBP14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 TRBC1P01850 177 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 BCKDHAP12694 445 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 GRK3P35626 688 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 MAPKAPK2P49137 400 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 BCAP31P51572 246 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 PRKAG1P54619 331 aa14.05□□□□□ -0.16
TNFRSF1B-201ENST00000376259 CDH4P55283 916 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms