RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 OTOAQ7RTW8 1153 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 SLC9B2Q86UD5 537 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 PPP1R3BQ86XI6 285 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 SLC38A9Q8NBW4 561 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 UTP4Q969X6 686 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 NSL1Q96IY1 281 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 PLEKHG4BQ96PX9 1271 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 TRAPPC9Q96Q05 1148 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 SMAD5Q99717 465 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 BARD1Q99728 777 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 HEMGNQ9BXL5 484 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 MANSC1Q9H8J5 431 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 ZBTB20Q9HC78 741 aaPredicted RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 DNPEPQ9ULA0 475 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 FARSAQ9Y285 508 aaKnown RBP10.69□□□□□ -0.7
DDX39B-201ENST00000376177 CSAG2Q9Y5P2 127 aa10.69□□□□□ -0.7
DDX39B-201ENST00000376177 A0A1B0GTL3 188 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CCDC189A1A4V9 331 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 POC1B-GALNT4F8VUJ3 575 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 E2F3O00716 465 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 UBXN7O94888 489 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 DHRS4L1P0CG22 281 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 F3P13726 295 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 KRT4P19013 534 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 PAX7P23759 505 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 RPA3P35244 121 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CDKN2BP42772 138 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 SSR1P43307 286 aaKnown RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 VPS41P49754 854 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ARFIP2P53365 341 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CDK16Q00536 496 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 TRAF2Q12933 501 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 KPNB1Q14974 876 aaKnown RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 MUM1Q2TAK8 710 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 PRAMEF17Q5VTA0 474 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CACHD1Q5VU97 1274 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ATG16L1Q676U5 607 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 MYO7BQ6PIF6 2116 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 PGBD5Q8N414 524 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 BANPQ8N9N5 519 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ZFAND2BQ8WV99 257 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CENPIQ92674 756 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 STMN2Q93045 179 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 LRRC39Q96DD0 335 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 MTBPQ96DY7 904 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 COX14Q96I36 57 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 APOPT1Q96IL0 206 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 HERPUD2Q9BSE4 406 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 GPR87Q9BY21 358 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 FAM192AQ9GZU8 254 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 STN1Q9H668 368 aaKnown RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.68□□□□□ -0.73e-13■■□□□ 11.4
DDX39B-201ENST00000376177 GPR83Q9NYM4 423 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 HAO1Q9UJM8 370 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ZNF180Q9UJW8 692 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 B3GNT3Q9Y2A9 372 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 PCDHGB7Q9Y5F8 929 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 COPG1Q9Y678 874 aaKnown RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ZNF469Q96JG9 3925 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 IGHV5-51A0A0C4DH38 117 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 TCRBV5S1A1TA0A578 114 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 LILRA5A6NI73 299 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 HTRA2O43464 458 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ZNF189O75820 626 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 MT-ND3P03897 115 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 EBLN1P0CF75 366 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 T-ENOLP0DO92 83 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 HOXB4P17483 251 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 LPOP22079 712 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 VARSP26640 1264 aaKnown RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 TEAD1P28347 426 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 SDC4P31431 198 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 GLRBP48167 497 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CLCN2P51788 898 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 RPS15P62841 145 aaKnown RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 POLR2LP62875 67 aaKnown RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 SLC18A2Q05940 514 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 DPTQ07507 201 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 TUBB3Q13509 450 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 C11orf91Q3C1V1 193 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 DNAL1Q4LDG9 190 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ZFYVE27Q5T4F4 411 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ZNF648Q5T619 568 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 MFSD7Q6UXD7 560 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ADAMTSL4Q6UY14 1074 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 STRADAQ7RTN6 431 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CUZD1Q86UP6 607 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 FJX1Q86VR8 437 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 CPNE8Q86YQ8 564 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ARHGAP12Q8IWW6 846 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 PALM2Q8IXS6 379 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 MMP21Q8N119 569 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 ZBTB2Q8N680 514 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 NAT8LQ8N9F0 302 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
DDX39B-201ENST00000376177 KLHL6Q8WZ60 621 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 MCUR1Q96AQ8 359 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 SH3KBP1Q96B97 665 aa10.68□□□□□ -0.7
DDX39B-201ENST00000376177 AP2M1Q96CW1 435 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms