RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 PRMT5O14744 637 aaPredicted RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 CD3EAPO15446 510 aaKnown RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 KDM1AO60341 852 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 TMEM63AO94886 807 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 FGGP02679 453 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 APOA4P06727 396 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 CTSBP07858 339 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 CBSLP0DN79 551 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 AOAHP28039 575 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 PEBP1P30086 187 aaKnown RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 CBSP35520 551 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 KCNJ1P48048 391 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 RAB28P51157 221 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 BASP1P80723 227 aaKnown RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 NCF4Q15080 339 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 AARS2Q5JTZ9 985 aaKnown RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 MLIPQ5VWP3 458 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 ZNF385CQ66K41 422 aaPredicted RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 C4orf22Q6V702 233 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 GSTA5Q7RTV2 222 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 FAM20CQ8IXL6 584 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 KRT222Q8N1A0 295 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 DNAJC22Q8N4W6 341 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 C2orf73Q8N5S3 287 aaPredicted RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 MIB2Q96AX9 1013 aa13.73□□□□□ -0.21
NELFE-201ENST00000375425 EIF2B3Q9NR50 452 aaKnown RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 MARCH4Q9P2E8 410 aaPredicted RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 PCDHGA9Q9Y5G4 932 aaKnown RBP13.73□□□□□ -0.21
NELFE-201ENST00000375425 C9J4A7 227 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 SLCO2B1O94956 709 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 PKLRP30613 574 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 NPY2RP49146 381 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 TTPAP49638 278 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 PGDP52209 483 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 UBAP2LQ14157 1087 aaKnown RBP13.72□□□□□ -0.21
NELFE-201ENST00000375425 KYNUQ16719 465 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 KCTD19Q17RG1 926 aaPredicted RBP13.72□□□□□ -0.21
NELFE-201ENST00000375425 SLC5A12Q1EHB4 618 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 C1orf189Q5VU69 101 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 RHBDD2Q6NTF9 364 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 ZNF662Q6ZS27 426 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 MED25Q71SY5 747 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 LINC01555Q8NAE3 123 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 MAIP1Q8WWC4 291 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 DHRS4Q9BTZ2 278 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 IL22Q9GZX6 179 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 TREX1Q9NSU2 369 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 CIDEBQ9UHD4 219 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 ZKSCAN5Q9Y2L8 839 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 KLHL20Q9Y2M5 609 aa13.72□□□□□ -0.21
NELFE-201ENST00000375425 AP3B1O00203 1094 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 ZNF185O15231 689 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 ZSCAN9O15535 394 aaPredicted RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 KLF7O75840 302 aaPredicted RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 CEACAM4O75871 244 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 RPN2P04844 631 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 CCDC175P0C221 793 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 CD9P21926 228 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 NMBRP28336 390 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 DCDP81605 110 aaKnown RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 GRB7Q14451 532 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 PTRHD1Q6GMV3 140 aaKnown RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 UNC5DQ6UXZ4 953 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 ZNF655Q8N720 491 aaPredicted RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 IL17FQ96PD4 163 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 GBP5Q96PP8 586 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 MENTQ9BUN1 341 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 P2RY12Q9H244 342 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 IRAK4Q9NWZ3 460 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 DHCR7Q9UBM7 475 aaKnown RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 PLCL2Q9UPR0 1127 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 PADI2Q9Y2J8 665 aa13.71□□□□□ -0.22
NELFE-201ENST00000375425 PRRC2CQ9Y520 2896 aaKnown RBP13.71□□□□□ -0.22
NELFE-201ENST00000375425 A6NL46 340 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 TTLL8A6PVC2 850 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 CYSRT1A8MQ03 144 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 CEP104O60308 925 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 NDUFS3O75489 264 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 MAGP20916 626 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 MGAT1P26572 445 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 CXCR5P32302 372 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 CD97P48960 835 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 ATP1A4Q13733 1029 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 SSPNQ14714 243 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 NADK2Q4G0N4 442 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 TLDC1Q6P9B6 456 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 CES3Q6UWW8 571 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 DCUN1D3Q8IWE4 304 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 LRRC8AQ8IWT6 810 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 FDCSPQ8NFU4 85 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 SLC22A18Q96BI1 424 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 MFSD3Q96ES6 412 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 PANX3Q96QZ0 392 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 C17orf62Q9BQA9 187 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 KIFC1Q9BW19 673 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms