RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PRAMEF14Q5SWL7 426 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 ZNF678Q5SXM1 525 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 PRAMEF13Q5VWM6 474 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 C11orf65Q8NCR3 313 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 DUSP26Q9BV47 211 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 BOCQ9BWV1 1114 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 TXLNGYQ9BZA5 131 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 MRM3Q9HC36 420 aaKnown RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 MAT2BQ9NZL9 334 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 G6PDP11413 515 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 ITGA2P17301 1181 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 EN2P19622 333 aaPredicted RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 ALDH4A1P30038 563 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 DSC1Q08554 894 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 EPGNQ6UW88 154 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 ARMCX6Q7L4S7 300 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 THOC6Q86W42 341 aaKnown RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 TREML1Q86YW5 311 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 TRAPPC9Q96Q05 1148 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 TMEM245Q9H330 911 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 MRPS30Q9NP92 439 aaKnown RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 DDX28Q9NUL7 540 aaKnown RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 SAMD4AQ9UPU9 718 aaKnown RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 E7ENX8 843 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 TP73O15350 636 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 HMGCLP35914 325 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 RELTQ969Z4 430 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 CEP44Q9C0F1 390 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 OGDHLQ9ULD0 1010 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 A0A0J9YVX5 310 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 GRID2O43424 1007 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 OR4F3Q6IEY1 312 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 EPHX4Q8IUS5 362 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 FAM20CQ8IXL6 584 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 DPP10Q8N608 796 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 ZNF540Q8NDQ6 660 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 OR4E2Q8NGC2 313 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 WDR60Q8WVS4 1066 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 SLC22A12Q96S37 553 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 PTGDR2Q9Y5Y4 395 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 CDK5RAP2Q96SN8 1893 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 GPR39O43194 453 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 GJB3O75712 270 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 BCL10O95999 233 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 CCNYL3P0C7X3 344 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 CKMT2P17540 419 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 PRDX6P30041 224 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 SLC2A7Q6PXP3 512 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 ABRAXAS1Q6UWZ7 409 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 ZNF783Q6ZMS7 281 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 ERN2Q76MJ5 926 aaKnown RBP17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 PRICKLE1Q96MT3 831 aaPredicted RBP17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 TOX2Q96NM4 488 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 SEMA3GQ9NS98 782 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 ENOPH1Q9UHY7 261 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 TBX10O75333 385 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 CCNDBP1O95273 360 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 FEN1P39748 380 aaKnown RBP17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 LAPTM5Q13571 262 aa17.56■□□□□ 0.4
PTPDC1-202ENST00000375360 RHPN2P1A8MT19 583 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 ITGAXP20702 1163 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 CTSOP43234 321 aaPredicted RBP17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 HNMTP50135 292 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 BIKQ13323 160 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 FAM110BQ8TC76 370 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 KHSRPQ92945 711 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 NDEL1Q9GZM8 345 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 FAM53CQ9NYF3 392 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 HIDE1A8MVS5 230 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 B4DGG1 531 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 GMFGO60234 142 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 MGRN1O60291 552 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 KLK1P06870 262 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 MYL12AP19105 171 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 ARCN1P48444 511 aaKnown RBP17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 EPS8Q12929 822 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 TECRLQ5HYJ1 363 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 HEATR4Q86WZ0 1026 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 OR10Q1Q8NGQ4 319 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 FIBINQ8TAL6 211 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 DENND1AQ8TEH3 1009 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 GLYATL1Q969I3 302 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 ROPN1LQ96C74 230 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 TMEM74Q96NL1 305 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 P2RY13Q9BPV8 354 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 OSBPL11Q9BXB4 747 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 SFXN1Q9H9B4 322 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 INTS7Q9NVH2 962 aaKnown RBP17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 FAM234BA2RU67 622 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 SRCP12931 536 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 ITPKBP27987 946 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 SLC26A3P40879 764 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 CDC42P60953 191 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 MTAPQ13126 283 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 OR5AK3PQ8NH89 298 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 MPP4Q96JB8 637 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 EFCAB11Q9BUY7 163 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 PDP1Q9P0J1 537 aaPredicted RBP17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 MAST2Q6P0Q8 1798 aa17.55■□□□□ 0.4
PTPDC1-202ENST00000375360 BHMG1C9JSJ3 638 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms