RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CAPN15O75808 1086 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CCNDBP1O95273 360 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 HIST1H2ABP04908 130 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 RGS1Q08116 209 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 SPATS1Q496A3 300 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 OGFRL1Q5TC84 451 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 STEAP4Q687X5 459 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 OR4F3Q6IEY1 312 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CGB2Q6NT52 195 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 HIST3H2AQ7L7L0 130 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 FBXO27Q8NI29 283 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 C9orf43Q8TAL5 461 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 OR8D1Q8WZ84 308 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 HIST1H2ACQ93077 130 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 UTP4Q969X6 686 aaKnown RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 PLD4Q96BZ4 506 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 COMMD9Q9P000 198 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 VPS29Q9UBQ0 182 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 N6AMT1Q9Y5N5 214 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 IRAK3Q9Y616 596 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CPQQ9Y646 472 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 HAS3O00219 553 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 RGS20O76081 388 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 NPPAP01160 153 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 ENGP17813 658 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 SEMG2Q02383 582 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CRTC2Q53ET0 693 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 TECRLQ5HYJ1 363 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 NANOGP8Q6NSW7 305 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 PHYKPLQ8IUZ5 450 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 LGI4Q8N135 537 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 MEIOBQ8N635 442 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CLDN19Q8N6F1 224 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 GFM1Q96RP9 751 aaKnown RBP11.31□□□□□ -0.6
PTCH1-203ENST00000375274 ANKRA2Q9H9E1 313 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 NANOGQ9H9S0 305 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 TVP23BQ9NYZ1 205 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 NDOR1Q9UHB4 597 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CLEC4AQ9UMR7 237 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 MAN2B2Q9Y2E5 1009 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 GPSM3Q9Y4H4 160 aa11.31□□□□□ -0.6
PTCH1-203ENST00000375274 CNTRLQ7Z7A1 2325 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ANKRD66B4E2M5 251 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 DENRO43583 198 aaKnown RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 INMTO95050 263 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 IFNGP01579 166 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 LAMP2P13473 410 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 FPR1P21462 350 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 PPM1AP35813 382 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 GDF5P43026 501 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 PGGT1BP53609 377 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 CLDN10P78369 228 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 EMX2Q04743 252 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SLC9A5Q14940 896 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 KCNA10Q16322 511 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 RAB6CQ53S08 254 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SMYD5Q6GMV2 418 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 CLIP4Q8N3C7 705 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 BEND7Q8N7W2 519 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ARL14EPQ8N8R7 260 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 OR10Q1Q8NGQ4 319 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 FCRL4Q96PJ5 515 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 TSGA13Q96PP4 275 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 RAB6CQ9H0N0 254 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SLC32A1Q9H598 525 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF696Q9H7X3 374 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SMURF2Q9HAU4 748 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 MAT2BQ9NZL9 334 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 NCKAP1Q9Y2A7 1128 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 KHDRBS3O75525 346 aaKnown RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SNAP29O95721 258 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SAGP10523 405 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 RHAGQ02094 409 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 CREMQ03060 361 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 HSPB3Q12988 150 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SUZ12Q15022 739 aaKnown RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 TGFBIQ15582 683 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 TNFAIP8L3Q5GJ75 292 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 C6orf136Q5SQH8 315 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 FRG2Q64ET8 278 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 DMRTB1Q96MA1 342 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ZNF778Q96MU6 729 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 FRG2BQ96QU4 278 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 MRM3Q9HC36 420 aaKnown RBP11.3□□□□□ -0.6
PTCH1-203ENST00000375274 CRTAC1Q9NQ79 661 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 TRPV5Q9NQA5 729 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 FLRT1Q9NZU1 646 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 MAP10Q9P2G4 905 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 ILVBLA1L0T0 632 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 H3BNH8 94 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 PROZP22891 400 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 NUDT6P53370 316 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 SP3Q02447 781 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 NIPAL4Q0D2K0 466 aa11.3□□□□□ -0.6
PTCH1-203ENST00000375274 CXorf57Q6NSI4 855 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms