RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SLC7A2P52569 658 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PLOD1Q02809 727 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PCDH1Q08174 1060 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ABRQ12979 859 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GTF2H3Q13889 308 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TAF11Q15544 211 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CST6Q15828 149 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MUM1Q2TAK8 710 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RFTN2Q52LD8 501 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 IL23RQ5VWK5 629 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LAYNQ6UX15 382 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RNF111Q6ZNA4 994 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RNF148Q8N7C7 305 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 HIPK4Q8NE63 616 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 DNAJC9Q8WXX5 260 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LRRC58Q96CX6 371 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 COX14Q96I36 57 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FOPNLQ96NB1 174 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZNF570Q96NI8 536 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ACTL8Q9H568 366 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZDHHC4Q9NPG8 344 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FARSBQ9NSD9 589 aaKnown RBP17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PSMD13Q9UNM6 376 aa17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 POLR3HQ9Y535 204 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NUMA1Q14980 2115 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CCDC154A6NI56 674 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 C9JVG2 144 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 BAG2O95816 211 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NPPAP01160 153 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 G6PDP11413 515 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ACADSP16219 412 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GNPDA1P46926 289 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZNF33BQ06732 778 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 AGERQ15109 404 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TLR1Q15399 786 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 AGBL4Q5VU57 503 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 XKR5Q6UX68 686 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TRIM74Q86UV6 250 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RGL4Q8IZJ4 473 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 AADATQ8N5Z0 425 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LILRA3Q8N6C8 439 aaPredicted RBP17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 BHLHE22Q8NFJ8 381 aaPredicted RBP17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RPP25Q9BUL9 199 aaKnown RBP17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 STOX2Q9P2F5 926 aaPredicted RBP17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ATXN10Q9UBB4 475 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 EPS15L1Q9UBC2 864 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 EIF3LQ9Y262 564 aaKnown RBP17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SLC22A14Q9Y267 594 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 DOCK9Q9BZ29 2069 aa17.53■□□□□ 0.4
HLA-DQB1-201ENST00000374943 H3BM21 787 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CASQ2O14958 399 aaPredicted RBP17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MID1O15344 667 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RNASEH1O60930 286 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SLC2A4P14672 509 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PCSK2P16519 638 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ATP6V1C1P21283 382 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 C5AR1P21730 350 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TAS2R38P59533 333 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RPL38P63173 70 aaKnown RBP17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 IMPG1Q17R60 797 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PRR23BQ6ZRT6 265 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TRAPPC5Q8IUR0 188 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CHPFQ8IZ52 775 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 DPP10Q8N608 796 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PYCR2Q96C36 320 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 HIC2Q96JB3 615 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LRTM1Q9HBL6 345 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 C1orf109Q9NX04 203 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FAM8A1Q9UBU6 413 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MCM8Q9UJA3 840 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ATG2BQ96BY7 2078 aa17.52■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CROCCQ5TZA2 2017 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 NME4O00746 187 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 RSL1D1O76021 490 aaKnown RBP17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PDYNP01213 254 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 C8BP07358 591 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HSD17B1P14061 328 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 JUPP14923 745 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SLC6A2P23975 617 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PDHA2P29803 388 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 PBLDP30039 288 aaPredicted RBP17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 MSX2P35548 267 aaPredicted RBP17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 KIR2DL1P43626 348 aaPredicted RBP17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DLX2Q07687 328 aaPredicted RBP17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 CPSF6Q16630 551 aaKnown RBP eCLIP17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 LIPJQ5W064 366 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 AGTRAPQ6RW13 159 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ZNF547Q8IVP9 402 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 OR56A3Q8NH54 315 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 HM13Q8TCT9 377 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 VPS33AQ96AX1 596 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 NAF1Q96HR8 494 aaKnown RBP17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SLC45A3Q96JT2 553 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 SLC39A3Q9BRY0 314 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ACPTQ9BZG2 426 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 ATG10Q9H0Y0 220 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 DPEP2Q9H4A9 486 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 LMCD1Q9NZU5 365 aa17.52■□□□□ 0.39
HLA-DQB1-201ENST00000374943 C6orf203Q9P0P8 240 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms