RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SLC9A3R1O14745 358 aaPredicted RBP17.07■□□□□ 0.32
PTPRU-202ENST00000373779 ENGP17813 658 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 STT3AP46977 705 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 CREMQ03060 361 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 SPANXN4Q5MJ08 99 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 C11orf88Q6PI97 169 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 TMPRSS11AQ6ZMR5 421 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 LYSMD3Q7Z3D4 306 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 FNDC8Q8TC99 324 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 LRCH3Q96II8 777 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 CNPPD1Q9BV87 410 aa17.07■□□□□ 0.32
PTPRU-202ENST00000373779 NEDD8-MDP1E9PL57 170 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ALPIP09923 528 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 PRKACGP22612 351 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 AZGP1P25311 298 aaKnown RBP17.06■□□□□ 0.32
PTPRU-202ENST00000373779 HTR1EP28566 365 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 CDKN2DP55273 166 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 GPR33Q49SQ1 333 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 C1orf74Q96LT6 269 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 KLHL32Q96NJ5 620 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 CCDC3Q9BQI4 270 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 MRPL39Q9NYK5 338 aaKnown RBP17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ANKRD66B4E2M5 251 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 MANBAO00462 879 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 GADD45GO95257 159 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 EPOP01588 193 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 CCL23P55773 120 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 SCN1BQ07699 218 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 OR4F3Q6IEY1 312 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 C17orf64Q86WR6 236 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 EGFL6Q8IUX8 553 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 FIBCD1Q8N539 461 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 SUSD6Q92537 303 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 IL12RB2Q99665 862 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 C11orf16Q9NQ32 467 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 EBF1Q9UH73 591 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 PCDHGA11Q9Y5H2 935 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 DOCK2Q92608 1830 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 C9P02748 559 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ANXA8P13928 327 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 TIE1P35590 1138 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 GGT5P36269 586 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ADAM17P78536 824 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 RFTN2Q52LD8 501 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ZNF544Q6NX49 715 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 LRRC17Q8N6Y2 441 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 OR10G2Q8NGC3 310 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 MTERF1Q99551 399 aaKnown RBP17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ITPAQ9BY32 194 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 SLC32A1Q9H598 525 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 AMBNQ9NP70 447 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ONECUT3O60422 494 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-202ENST00000373779 PNLIPRP1P54315 467 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 CHST15Q7LFX5 561 aaPredicted RBP17.06■□□□□ 0.32
PTPRU-202ENST00000373779 CDH24Q86UP0 819 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 ZNF382Q96SR6 550 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 SLITRK2Q9H156 845 aa17.06■□□□□ 0.32
PTPRU-202ENST00000373779 MRPS7Q9Y2R9 242 aaKnown RBP17.06■□□□□ 0.32
PTPRU-202ENST00000373779 CARNS1A5YM72 827 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 MYL9P24844 172 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 SNAPC1Q16533 368 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 C20orf27Q9GZN8 174 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 AIG1Q9NVV5 245 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 PCDHGB3Q9Y5G1 929 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 EEDO75530 441 aaKnown RBP17.05■□□□□ 0.32
PTPRU-202ENST00000373779 FGBP02675 491 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 PRG2P13727 222 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 SDC2P34741 201 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 TMCO6Q96DC7 493 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 KCNC2Q96PR1 638 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 SNX7Q9UNH6 387 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 LOC730098B7Z3J9 87 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 HAS3O00219 553 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 SNAI1O95863 264 aaPredicted RBP17.05■□□□□ 0.32
PTPRU-202ENST00000373779 RFC2P35250 354 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 KCNQ1P51787 676 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 BLOC1S3Q6QNY0 202 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 PRSS55Q6UWB4 352 aaPredicted RBP17.05■□□□□ 0.32
PTPRU-202ENST00000373779 ZNF513Q8N8E2 541 aaPredicted RBP17.05■□□□□ 0.32
PTPRU-202ENST00000373779 UXS1Q8NBZ7 420 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 MZB1Q8WU39 189 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 ZNF222Q9UK12 451 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 ING4Q9UNL4 249 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 TFPTP0C1Z6 253 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 C1QTNF8P60827 252 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 CCL14Q16627 93 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 LRRC70Q7Z2Q7 622 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 SYVN1Q86TM6 617 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 ABCB9Q9NP78 766 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 TMEM39AQ9NV64 488 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 DPP7Q9UHL4 492 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 PCDHB3Q9Y5E6 796 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 PLOD3O60568 738 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 BMP2P12643 396 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 FPR1P21462 350 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 MYF6P23409 242 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 CSKP41240 450 aa17.05■□□□□ 0.32
PTPRU-202ENST00000373779 GDF5P43026 501 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms