RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 C3orf49Q96BT1 292 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 FUZQ9BT04 418 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 YTHDF1Q9BYJ9 559 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 PPP4R1LQ9P1A2 415 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 U3KQV3 271 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 DNAJA2O60884 412 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 MT-ND1P03886 318 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 ANXA5P08758 320 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 JUPP14923 745 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 CD36P16671 472 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 GSTM2P28161 218 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 NOS2P35228 1153 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 SNTA1Q13424 505 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 SOWAHAQ2M3V2 549 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 INTS6LQ5JSJ4 861 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 GPRC6AQ5T6X5 926 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 TMEM236Q5W0B7 351 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 CAND1Q86VP6 1230 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 BPHLQ86WA6 291 aaPredicted RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 TDRPQ86YL5 185 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 FAM20CQ8IXL6 584 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 C1GALT1C1Q96EU7 318 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 NMRAL1Q9HBL8 299 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 ATRXP46100 2492 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 RALGAPA2Q2PPJ7 1873 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 SLITRK5O94991 958 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 S100PP25815 95 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 HPCAL1P37235 193 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 GPR85P60893 370 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 MXD1Q05195 221 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 PAQR7Q86WK9 346 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 CCDC107Q8WV48 283 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 DDX1Q92499 740 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 NDRG1Q92597 394 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 DPF3Q92784 378 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 MRPL57Q9BQC6 102 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.47□□□□□ -1.372e-9■■■■□ 26.6
CHD6-203ENST00000373233 LYARQ9NX58 379 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 MARCH2Q9P0N8 246 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 POMPQ9Y244 141 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 IFT52Q9Y366 437 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 TCRBV9S1A1TA0A576 114 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 BNIP3LO60238 219 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 PKLRP30613 574 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 SSTR1P30872 391 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 CDKN2BP42772 138 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 ZNF135P52742 658 aaPredicted RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 CREMQ03060 361 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 INCA1Q0VD86 236 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 CYP2A13Q16696 494 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 SPANXN3Q5MJ09 141 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 NPAS4Q8IUM7 802 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 DSELQ8IZU8 1212 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 SCML4Q8N228 414 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 TESCQ96BS2 214 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 TWNKQ96RR1 684 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 BHLHE41Q9C0J9 482 aaPredicted RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 RNF6Q9Y252 685 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 HCN4Q9Y3Q4 1203 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 FOXO6A8MYZ6 492 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 ACOX3O15254 700 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 SSX4O60224 188 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 INMTO95050 263 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 FGFR1P11362 822 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 KCNE1P15382 129 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 HLA-FP30511 346 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 RGS19P49795 217 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 WNT7BP56706 349 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 RBM48Q5RL73 367 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 SETD6Q8TBK2 473 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 TRUB1Q8WWH5 349 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 TTPALQ9BTX7 342 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 CLPBQ9H078 707 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 IFT22Q9H7X7 185 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 THG1LQ9NWX6 298 aaKnown RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 ASF1AQ9Y294 204 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 TBC1D30Q9Y2I9 924 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 IRGMA1A4Y4 181 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 FGF10O15520 208 aaPredicted RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 VPS26AO75436 327 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 DNAJB5O75953 348 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 RLN2P04090 185 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 CES1P23141 567 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 Q3ZCU0 254 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 C10orf53Q8N6V4 93 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 C10orf82Q8WW14 230 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 PTERQ96BW5 349 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 RPRD1AQ96P16 312 aaPredicted RBP6.47□□□□□ -1.37
CHD6-203ENST00000373233 PANX3Q96QZ0 392 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 ABCG4Q9H172 646 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 RGCCQ9H4X1 137 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 COQ10BQ9H8M1 238 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 ITM2CQ9NQX7 267 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 PCDHB8Q9UN66 801 aa6.47□□□□□ -1.37
CHD6-203ENST00000373233 OR6C75A6NL08 312 aa6.46□□□□□ -1.37
CHD6-203ENST00000373233 HDAC3O15379 428 aa6.46□□□□□ -1.37
CHD6-203ENST00000373233 ANXA9O76027 345 aa6.46□□□□□ -1.37
CHD6-203ENST00000373233 IPO13O94829 963 aaKnown RBP6.46□□□□□ -1.37
CHD6-203ENST00000373233 CCNDBP1O95273 360 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms