RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 SEMA3BQ13214 749 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PTK6Q13882 451 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 TUBB2AQ13885 445 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 TUBA3EQ6PEY2 450 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 SCML4Q8N228 414 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 BBOF1Q8ND07 529 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 OR5AR1Q8NGP9 310 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 SLC35B2Q8TB61 432 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 IFI44Q8TCB0 444 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 SLC37A2Q8TED4 501 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 THAP3Q8WTV1 239 aaPredicted RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 MR1Q95460 341 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 DTD2Q96FN9 168 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 MSANTD3Q96H12 275 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ZNF599Q96NL3 588 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 FCRL4Q96PJ5 515 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PRRX2Q99811 253 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 TUBB2BQ9BVA1 445 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 SERHL2Q9H4I8 314 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ALKBH4Q9NXW9 302 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 TAS2R13Q9NYV9 303 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 SCML1Q9UN30 329 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 CFAP47Q6ZTR5 3102 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PIPSLA2A3N6 862 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PYCARD-AS1I3L0S3 204 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 GMFGO60234 142 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ATP1B2P14415 290 aaPredicted RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 ALDH9A1P49189 494 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 CPSF6Q16630 551 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP1-202ENST00000371146 KHDC1Q4VXA5 237 aaKnown RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 AARS2Q5JTZ9 985 aaKnown RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 MANEALQ5VSG8 457 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 MYO7BQ6PIF6 2116 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 UBE2R2Q712K3 238 aaPredicted RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 GPR156Q8NFN8 814 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ASZ1Q8WWH4 475 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PEX13Q92968 403 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 CCDC74AQ96AQ1 378 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 CLDN23Q96B33 292 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 GABRG3Q99928 467 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 NUDT22Q9BRQ3 303 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ZSCAN5AQ9BUG6 496 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ZNF358Q9NW07 568 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 LRRC42Q9Y546 428 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PKDREJQ9NTG1 2253 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 FAM95CA0A1B0GW59 222 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 SOCS5O75159 536 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PRLP01236 227 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 CATP04040 527 aaKnown RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 KRT4P19013 534 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 RAB15P59190 212 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 FZD5Q13467 585 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PFKFB4Q16877 469 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 AP5B1Q2VPB7 878 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ARHGAP40Q5TG30 622 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 HES3Q5TGS1 186 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 OR52E8Q6IFG1 317 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 PAQR3Q6TCH7 311 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 VASH2Q86V25 355 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 LRRC6Q86X45 466 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 TMEM126BQ8IUX1 230 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 IGDCC3Q8IVU1 814 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 MFSD2AQ8NA29 543 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 ZNF548Q8NEK5 533 aaPredicted RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 MCOLN3Q8TDD5 553 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 BTN2A2Q8WVV5 523 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 GFM2Q969S9 779 aaKnown RBP6.87□□□□□ -1.31
USP1-202ENST00000371146 CERS2Q96G23 380 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 LRIG1Q96JA1 1093 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 SIKE1Q9BRV8 207 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 NDEL1Q9GZM8 345 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 FAM114A2Q9NRY5 505 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 TCAF1Q9Y4C2 921 aa6.87□□□□□ -1.31
USP1-202ENST00000371146 TANC1Q9C0D5 1861 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 SIP14410 1827 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 CACNA1CQ13936 2221 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 NLRC5Q86WI3 1866 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 F8W8V4 182 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 CDK2AP1O14519 115 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 CAPN5O15484 640 aaPredicted RBP6.86□□□□□ -1.31
USP1-202ENST00000371146 SERPINB7O75635 380 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 PKMP14618 531 aaKnown RBP6.86□□□□□ -1.31
USP1-202ENST00000371146 STMN1P16949 149 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 TNNI3P19429 210 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 GSTT1P30711 240 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 SLC1A2P43004 574 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 TTPAP49638 278 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 PLA2G16P53816 162 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 GFERP55789 205 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 BPIFB3P59826 476 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 NFATC4Q14934 902 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 TAF1AQ15573 450 aaPredicted RBP6.86□□□□□ -1.31
USP1-202ENST00000371146 AFTPHQ6ULP2 937 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 ZNF783Q6ZMS7 281 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 RASGEF1AQ8N9B8 481 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 CEP76Q8TAP6 659 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 CALML6Q8TD86 181 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 STYXQ8WUJ0 223 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 RSC1A1Q92681 617 aa6.86□□□□□ -1.31
USP1-202ENST00000371146 RBM14Q96PK6 669 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms