RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ERICH4A6NGS2 130 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CCDC154A6NI56 674 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 EBAG9O00559 213 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CCL22O00626 93 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 EDF1O60869 148 aaKnown RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 IL1BP01584 269 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 PROCP04070 461 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 UGT2B4P06133 528 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 BPGMP07738 259 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 ALPIP09923 528 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 SLC35E2BP0CK96 405 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CTPS1P17812 591 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 GKP32189 559 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 MC4RP32245 332 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 PTPRCAPQ14761 206 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 E2F5Q15329 346 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 GAB4Q2WGN9 574 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 HECTD2Q5U5R9 776 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 ZDHHC20Q5W0Z9 365 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CERS6Q6ZMG9 384 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 ESPNLQ6ZVH7 1005 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 PIGWQ7Z7B1 504 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 TBC1D1Q86TI0 1168 aaPredicted RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 ARMC10Q8N2F6 343 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 TERB1Q8NA31 727 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 RDH11Q8TC12 318 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 UCMAQ8WVF2 138 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 SKA1Q96BD8 255 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 SCRN2Q96FV2 425 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 OMDQ99983 421 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 PLCD4Q9BRC7 762 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CCDC68Q9H2F9 335 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 C12orf65Q9H3J6 166 aaKnown RBP8.62□□□□□ -1.03
TPM3-213ENST00000368545 IL36AQ9UHA7 158 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 CDH22Q9UJ99 828 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 APPL1Q9UKG1 709 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 SLC30A1Q9Y6M5 507 aa8.62□□□□□ -1.03
TPM3-213ENST00000368545 A0A087WV48 116 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 TSPAN11A1L157 253 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 FAM90A27PA6NNH2 459 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 ENO4A6NNW6 628 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 RHPN2P1A8MT19 583 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 TRIM24O15164 1050 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 SNX3O60493 162 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 NDUFS3O75489 264 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 F7P08709 466 aaPredicted RBP8.61□□□□□ -1.03
TPM3-213ENST00000368545 CYP2A6P11509 494 aaPredicted RBP8.61□□□□□ -1.03
TPM3-213ENST00000368545 ZNF30P17039 623 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 SAT1P21673 171 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 HNF1BP35680 557 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 FNTBP49356 437 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 SLC16A1P53985 500 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 ADARP55265 1226 aaKnown RBP8.61□□□□□ -1.03
TPM3-213ENST00000368545 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
TPM3-213ENST00000368545 CACNG1Q06432 222 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 ITIH4Q14624 930 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 C3orf36Q3SXR2 165 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 KLC3Q6P597 504 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 TLDC1Q6P9B6 456 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 RNF111Q6ZNA4 994 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 NUDCD3Q8IVD9 361 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 NLGN4XQ8N0W4 816 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 CCDC197Q8NCU1 140 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 ACVR1CQ8NER5 493 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 FAM3CQ92520 227 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 UTP4Q969X6 686 aaKnown RBP8.61□□□□□ -1.03
TPM3-213ENST00000368545 VOPP1Q96AW1 172 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 RAX2Q96IS3 184 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 LMAN1LQ9HAT1 526 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 NMRAL1Q9HBL8 299 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 COPG2Q9UBF2 871 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 TMPRSS11EQ9UL52 423 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 EMCNQ9ULC0 261 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 VWA7Q9Y334 891 aa8.61□□□□□ -1.03
TPM3-213ENST00000368545 REV3LO60673 3130 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 EDDM13A0A1B0GTR0 161 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 WDR91A4D1P6 747 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 OTOL1A6NHN0 477 aaPredicted RBP8.6□□□□□ -1.03
TPM3-213ENST00000368545 TTC34A8MYJ7 566 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 PHGDHO43175 533 aaKnown RBP8.6□□□□□ -1.03
TPM3-213ENST00000368545 KLHL2O95198 593 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 TOP3BO95985 862 aaKnown RBP8.6□□□□□ -1.03
TPM3-213ENST00000368545 ITGALP20701 1170 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 FDXRP22570 491 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 SPAM1P38567 509 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 MAPK9P45984 424 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 SUOXP51687 545 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 PRKAA2P54646 552 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 LGALS4P56470 323 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 RIPPLY3P57055 190 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 TAS2R39P59534 338 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 KDSRQ06136 332 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 PEX6Q13608 980 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 SEMA3AQ14563 771 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 SF3A2Q15428 464 aaKnown RBP8.6□□□□□ -1.03
TPM3-213ENST00000368545 CDKN3Q16667 212 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 FAM83EQ2M2I3 478 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 ZRANB3Q5FWF4 1079 aa8.6□□□□□ -1.03
TPM3-213ENST00000368545 ZNF789Q5FWF6 425 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms