RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PABPN1LA6NDY0 278 aaKnown RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 A8MU76 341 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 BTN3A3O00478 584 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 KDM1AO60341 852 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 CDH16O75309 829 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 RFPL1O75677 317 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TCEA3O75764 348 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 GUCA1CO95843 209 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TOP3BO95985 862 aaKnown RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 HIST1H2AGP0C0S8 130 aaPredicted RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 PYGBP11216 843 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 HOXB3P14651 431 aaPredicted RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 CD1DP15813 335 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TFEBP19484 476 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 HIST1H2ADP20671 130 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 CSF2RBP32927 897 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 SHMT2P34897 504 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 PPP1CAP62136 330 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 GPLD1P80108 840 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 INSM1Q01101 510 aaPredicted RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 CFHR1Q03591 330 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 ZNF844Q08AG5 666 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 KRT71Q3SY84 523 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 CEP85LQ5SZL2 805 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TIFABQ6ZNK6 161 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TMPRSS9Q7Z410 1059 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 OOSP2Q86WS3 158 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TDRPQ86YL5 185 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 CENPLQ8N0S6 344 aaPredicted RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 IQCKQ8N0W5 287 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 PPFIBP2Q8ND30 876 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 ALKBH8Q96BT7 664 aaKnown RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 PTERQ96BW5 349 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 SCYL1Q96KG9 808 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 HIST1H2AHQ96KK5 128 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 UBXN10Q96LJ8 280 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TGM7Q96PF1 710 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 HIST1H2AJQ99878 128 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 H2AFJQ9BTM1 129 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 SLC12A9Q9BXP2 914 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TRIM54Q9BYV2 358 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 ROPN1BQ9BZX4 212 aaPredicted RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 CENPHQ9H3R5 247 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 ROPN1Q9HAT0 212 aaPredicted RBP13.48□□□□□ -0.25
TPM3-211ENST00000368531 NMRAL1Q9HBL8 299 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 IGSF5Q9NSI5 407 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 TMEM9Q9P0T7 183 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 LNPEPQ9UIQ6 1025 aa13.48□□□□□ -0.25
TPM3-211ENST00000368531 PTPRBP23467 1997 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 OR5K3A6NET4 321 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 ISM1B1AKI9 464 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 NTN3O00634 580 aaPredicted RBP13.47□□□□□ -0.25
TPM3-211ENST00000368531 SLC16A5O15375 505 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 CPNE6O95741 557 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 PKLRP30613 574 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 MAGEA12P43365 314 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 CSRP3P50461 194 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 RAB28P51157 221 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 GFERP55789 205 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 ATP6V0D1P61421 351 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 PRKAA1Q13131 559 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 SP140Q13342 867 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 FASTKQ14296 549 aaKnown RBP13.47□□□□□ -0.25
TPM3-211ENST00000368531 CASP8Q14790 479 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 OR4D1Q15615 310 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 N4BP2L1Q5TBK1 243 aaPredicted RBP13.47□□□□□ -0.25
TPM3-211ENST00000368531 HES3Q5TGS1 186 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 KLHL35Q6PF15 583 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 SBSNQ6UWP8 590 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 FAM92BQ6ZTR7 304 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 MARCH9Q86YJ5 346 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 RASGRP3Q8IV61 690 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 CHCHD4Q8N4Q1 142 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 RAB42Q8N4Z0 105 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 MZB1Q8WU39 189 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 ISL2Q96A47 359 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 TSNARE1Q96NA8 513 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 MENTQ9BUN1 341 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 SEMA6CQ9H3T2 930 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 ALG9Q9H6U8 611 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 EURLQ9NYK6 297 aa13.47□□□□□ -0.25
TPM3-211ENST00000368531 COL27A1Q8IZC6 1860 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 PIPSLA2A3N6 862 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 FAM149AA5PLN7 773 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 NCF1BA6NI72 391 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 NCF1CA8MVU1 366 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 D6RAR5 112 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 MYO1CO00159 1063 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 CAPN5O15484 640 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 KLHL2O95198 593 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 SLC16A8O95907 504 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 MT-CO3P00414 261 aa13.46□□□□□ -0.25
TPM3-211ENST00000368531 CHRM5P08912 532 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 NCF1P14598 390 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 H2AFXP16104 143 aaPredicted RBP13.46□□□□□ -0.25
TPM3-211ENST00000368531 CAPZBP47756 277 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms