RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 VWA7Q9Y334 891 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 IGF2RP11717 2491 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 EFCAB7A8K855 629 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 TLX3O43711 291 aaPredicted RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 PSIP1O75475 530 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 SNRNP200O75643 2136 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 DXOO77932 396 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 RPN2P04844 631 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 SAT1P21673 171 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 STX2P32856 288 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 SHMT2P34897 504 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 ZNF460Q14592 562 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 ARMC6Q6NXE6 501 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 NEK10Q6ZWH5 1172 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM129CQ86XR2 697 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 RELL1Q8IUW5 271 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 CTAGE3PQ8IX95 158 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 C2orf73Q8N5S3 287 aaPredicted RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 PPM1NQ8N819 430 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 BMPERQ8N8U9 685 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 CAVIN3Q969G5 261 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 FOPNLQ96NB1 174 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 TWSG1Q9GZX9 223 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 ZNF768Q9H5H4 540 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 DKK4Q9UBT3 224 aa14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 MTO1Q9Y2Z2 717 aaKnown RBP14.61□□□□□ -0.07
SMPDL3A-201ENST00000368440 DMXL2Q8TDJ6 3036 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 TLCD2A6NGC4 264 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 CDRT15L2A8MXV6 281 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 TAF4O00268 1085 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 SPAG6O75602 509 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 ITGA2BP08514 1039 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 CHRM5P08912 532 aaPredicted RBP14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 MPC1LP0DKB6 136 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 CBSLP0DN79 551 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 CD9P21926 228 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 CBSP35520 551 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 TAS2R39P59534 338 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 SH3BP2P78314 561 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 PRKAA1Q13131 559 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 PDAP1Q13442 181 aaKnown RBP14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 UGT3A1Q6NUS8 523 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 IGF2-ASQ6U949 168 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 TMEM207Q6UWW9 146 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 TAX1BP1Q86VP1 789 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 RASGRP3Q8IV61 690 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 FLVCR1-AS1Q8TAF5 88 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 DENND1AQ8TEH3 1009 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 KLHL6Q8WZ60 621 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 RBBP8Q99708 897 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 CPNE1Q99829 537 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 SIDT1Q9NXL6 827 aaKnown RBP14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 ACTR10Q9NZ32 417 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 AKAP7Q9P0M2 348 aaPredicted RBP14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 SEMA5BQ9P283 1151 aa14.6□□□□□ -0.07
SMPDL3A-201ENST00000368440 RASGRF2O14827 1237 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 TOX3O15405 576 aaPredicted RBP14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 ACSL3O95573 720 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 TSPAN12O95859 305 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 ENO3P13929 434 aaPredicted RBP14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 RBMS1P29558 406 aaKnown RBP14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 PRDX3P30048 256 aaKnown RBP14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 SKIV2L2P42285 1042 aaKnown RBP14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 RAB28P51157 221 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 TBC1D25Q3MII6 688 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 TRIM73Q86UV7 250 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 CEP97Q8IW35 865 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 KDF1Q8NAX2 398 aaPredicted RBP14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 DLG3Q92796 817 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 USP7Q93009 1102 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 RAD51AP1Q96B01 352 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 LINGO1Q96FE5 620 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 CD180Q99467 661 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 CAB39LQ9H9S4 337 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 APMAPQ9HDC9 416 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 ADAMTS6Q9UKP5 1117 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 PIPSLA2A3N6 862 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 C2orf74A8MZ97 194 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 C9orf172C9J069 976 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 PVRP15151 417 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 UGT2B7P16662 529 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 GP5P40197 560 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 CCNFP41002 786 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 KCNAB1Q14722 419 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 TTC23LQ6PF05 361 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 CEP128Q6ZU80 1094 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 PROSER1Q86XN7 944 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 FAM20CQ8IXL6 584 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 LSMEM2Q8N112 164 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 ASB11Q8WXH4 323 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 MRRFQ96E11 262 aaKnown RBP14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 OR2A14Q96R47 310 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 CTRCQ99895 268 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 KLHL25Q9H0H3 589 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 TSPYL1Q9H0U9 437 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 OR6C2Q9NZP2 312 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 FOXJ2Q9P0K8 574 aa14.59□□□□□ -0.07
SMPDL3A-201ENST00000368440 TMEM8BA6NDV4 472 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 GFYI3L273 518 aa14.58□□□□□ -0.08
SMPDL3A-201ENST00000368440 EIF3FO00303 357 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms