RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 IRAK1BP1Q5VVH5 260 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 HIST3H2AQ7L7L0 130 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 LRRTM4Q86VH4 590 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PRSS58Q8IYP2 241 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 C1orf52Q8N6N3 182 aaKnown RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 WDR60Q8WVS4 1066 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 TFGQ92734 400 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 HIST1H2ACQ93077 130 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 ABCG4Q9H172 646 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 SUCOQ9UBS9 1254 aaKnown RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 ERGIC3Q9Y282 383 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 TRIM43BA6NCK2 446 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 TNFRSF11BO00300 401 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 THRBP10828 461 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 RPL26P61254 145 aaKnown RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 UFM1P61960 85 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 NFATC2Q13469 925 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 SLC5A9Q2M3M2 681 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 KLHL12Q53G59 568 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 ZNF544Q6NX49 715 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PTCHD4Q6ZW05 846 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 TMEM145Q8NBT3 493 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 TEFMQ96QE5 360 aaKnown RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 MUC13Q9H3R2 512 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 SCN2BO60939 215 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 SERPINA1P01009 418 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 IFNW1P05000 195 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 SLC35E2BP0CK96 405 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 POU2F1P14859 743 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 RYKP34925 604 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 TMED10P49755 219 aaKnown RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 HNMTP50135 292 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PNLIPRP1P54315 467 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 CSNK2BP67870 215 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PPP1R8Q12972 351 aaKnown RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 MED22Q15528 200 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PRAMEF14Q5SWL7 426 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PSAPL1Q6NUJ1 521 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 SLC2A7Q6PXP3 512 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 AGTRAPQ6RW13 159 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 APCDD1Q8J025 514 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 MYDGFQ969H8 173 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 LRRC58Q96CX6 371 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 PRICKLE1Q96MT3 831 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 NSUN5Q96P11 429 aaKnown RBP12.05□□□□□ -0.48
PTPRK-203ENST00000368207 EFCAB11Q9BUY7 163 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 COQ10BQ9H8M1 238 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 ELOVL2Q9NXB9 296 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 FAM53CQ9NYF3 392 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 TAC3Q9UHF0 121 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 DAPK2Q9UIK4 370 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 RNF11Q9Y3C5 154 aa12.05□□□□□ -0.48
PTPRK-203ENST00000368207 EFCAB10A6NFE3 127 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 TGM5O43548 720 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 RB1P06400 928 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 TCF3P15923 654 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 AKT2P31751 481 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 SLC26A3P40879 764 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 ETV3P41162 512 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 LEPRP48357 1165 aaKnown RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 GSCP56915 257 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 TIMM50Q3ZCQ8 353 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 OR4F3Q6IEY1 312 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 COMMD2Q86X83 199 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 ADGRG2Q8IZP9 1017 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 TEX47Q8TBZ9 253 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 CANT1Q8WVQ1 401 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 POP5Q969H6 163 aaKnown RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 LRRC3Q9BY71 257 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 MRPS30Q9NP92 439 aaKnown RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 CTPS2Q9NRF8 586 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 SMIM31A0A1B0GVY4 71 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 LDB2O43679 373 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 LYNP07948 512 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 CCNFP41002 786 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 LBX1P52954 281 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 CDH12P55289 794 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 ZNF678Q5SXM1 525 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 SUSD1Q6UWL2 747 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 ZDHHC21Q8IVQ6 265 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 CMTR2Q8IYT2 770 aaKnown RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 C19orf18Q8NEA5 215 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 FAM81AQ8TBF8 368 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 DNASE1L2Q92874 299 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 Q96MT0 163 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 SLC22A2O15244 555 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 SOCS5O75159 536 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 S1PR4O95977 384 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 GBAP04062 536 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 G6PDP11413 515 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 HOXB2P14652 356 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 IL4RP24394 825 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 CD68P34810 354 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 TM4SF4P48230 202 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 DGKEP52429 567 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 RGS8P57771 180 aaPredicted RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 PPP1R3AQ16821 1122 aa12.04□□□□□ -0.48
PTPRK-203ENST00000368207 THOC6Q86W42 341 aaKnown RBP12.04□□□□□ -0.48
PTPRK-203ENST00000368207 TREML1Q86YW5 311 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms