RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 LRRC39Q96DD0 335 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 TRIM44Q96DX7 344 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-216ENST00000366744 CLIP3Q96DZ5 547 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 CFAP36Q96G28 342 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 EBNA1BP2Q99848 306 aaKnown RBP9.03□□□□□ -0.96
MRPL55-216ENST00000366744 TRIM51Q9BSJ1 452 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 PITPNM3Q9BZ71 974 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 FBXO6Q9NRD1 293 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-216ENST00000366744 KCND1Q9NSA2 647 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 IL1RAPL1Q9NZN1 696 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.03□□□□□ -0.96
MRPL55-216ENST00000366744 ZC3H7BQ9UGR2 993 aaKnown RBP9.03□□□□□ -0.96
MRPL55-216ENST00000366744 KCND3Q9UK17 655 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 PLAGL1Q9UM63 463 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 CHMP2BQ9UQN3 213 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 PCDHB3Q9Y5E6 796 aa9.03□□□□□ -0.96
MRPL55-216ENST00000366744 NUP210LQ5VU65 1888 aa9.02□□□□□ -0.96
MRPL55-216ENST00000366744 KALRNO60229 2985 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 FER1L5A0AVI2 2057 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 TMEM150CB9EJG8 249 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 BTN3A3O00478 584 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 RASGRF2O14827 1237 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 ATXN7O15265 892 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 SPAG6O75602 509 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 DLGAP3O95886 979 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 ITGB2P05107 769 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 KLK3P07288 261 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 HBQ1P09105 142 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 ENO3P13929 434 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 UGT2B7P16662 529 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 DLSTP36957 453 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 PTGIRP43119 386 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 BDKRB1P46663 353 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 RGS4P49798 205 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 ITGA8P53708 1063 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 ITGA1P56199 1179 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 CTBP1Q13363 440 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 GPR19Q15760 415 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 SLC5A12Q1EHB4 618 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 HSP90AA5PQ58FG0 334 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 UNC5AQ6ZN44 842 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 KIAA0408Q6ZU52 694 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 TAX1BP1Q86VP1 789 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 PALM2Q8IXS6 379 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 LSM14AQ8ND56 463 aaKnown RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 SNRNP27Q8WVK2 155 aaKnown RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 SEC14L1Q92503 715 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 CERS2Q96G23 380 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 TCTN2Q96GX1 697 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 BIRC8Q96P09 236 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 CATSPER2Q96P56 530 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 TRIM56Q9BRZ2 755 aaKnown RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 RAB17Q9H0T7 212 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 IARS2Q9NSE4 1012 aaKnown RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 SPATA7Q9P0W8 599 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 ZFATQ9P243 1243 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 SEMA5BQ9P283 1151 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 TRMT6Q9UJA5 497 aaKnown RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 SERTAD3Q9UJW9 196 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 RALYQ9UKM9 306 aaKnown RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 FBXO5Q9UKT4 447 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 UTP11Q9Y3A2 253 aaKnown RBP9.02□□□□□ -0.97
MRPL55-216ENST00000366744 FAM169AQ9Y6X4 670 aa9.02□□□□□ -0.97
MRPL55-216ENST00000366744 ZCWPW2A0A1B0GU75 182 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 C21orf140B9A014 251 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 C9J4A7 227 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 E7EQ34 232 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TK2O00142 265 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 SEC16AO15027 2179 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 SEC31AO94979 1220 aaKnown RBP9.01□□□□□ -0.97
MRPL55-216ENST00000366744 FKBP9O95302 570 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 MSL3P1P0C860 447 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 CBSLP0DN79 551 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 FOLR1P15328 257 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 ST6GAL1P15907 406 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TCN2P20062 427 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 CD9P21926 228 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 CBSP35520 551 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 DEKP35659 375 aaKnown RBP9.01□□□□□ -0.97
MRPL55-216ENST00000366744 RPS15P62841 145 aaKnown RBP9.01□□□□□ -0.97
MRPL55-216ENST00000366744 C2orf54Q08AI8 447 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TSTA3Q13630 321 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-216ENST00000366744 KIAA1614Q5VZ46 1190 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 PWWP2BQ6NUJ5 590 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 HIBCHQ6NVY1 386 aaPredicted RBP9.01□□□□□ -0.97
MRPL55-216ENST00000366744 CENPUQ71F23 418 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 VRK3Q8IV63 474 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 DENND6AQ8IWF6 608 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 ADGRF3Q8IZF5 1079 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 OR2L8Q8NGY9 312 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 STARD8Q92502 1023 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 SLC45A3Q96JT2 553 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 SIGLEC10Q96LC7 697 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 TRAPPC9Q96Q05 1148 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 C17orf62Q9BQA9 187 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 KLHL25Q9H0H3 589 aa9.01□□□□□ -0.97
MRPL55-216ENST00000366744 ACTR5Q9H9F9 607 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms