RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 GPR63Q9BZJ6 419 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 CLSTN2Q9H4D0 955 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 PARVAQ9NVD7 372 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 SPHK1Q9NYA1 384 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ACTR10Q9NZ32 417 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 ATP6V1DQ9Y5K8 247 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 MXRA5Q9NR99 2828 aa8.14□□□□□ -1.11
HMGB1P39-201ENST00000366304 TRAV17A0A0B4J275 112 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 MGAT4DA6NG13 374 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 FANCGO15287 622 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 BUD23O43709 281 aaKnown RBP8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 PRR35P0CG20 571 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 UGT2B7P16662 529 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 CA4P22748 312 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 CCNCP24863 283 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 MCM3P25205 808 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 GPC1P35052 558 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 PCK1P35558 622 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 ST13P50502 369 aaKnown RBP8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 HSF1Q00613 529 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 PRKAA1Q13131 559 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 GTF2H3Q13889 308 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 PAFAH1B3Q15102 231 aaKnown RBP8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 CEBPEQ15744 281 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 PCSK7Q16549 785 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 ATP13A4Q4VNC1 1196 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 TCP11X2Q5H9J9 407 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 SPESP1Q6UW49 350 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 FAM151BQ6UXP7 276 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 SPPL2CQ8IUH8 684 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 MARVELD2Q8N4S9 558 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 METTL27Q8N6F8 245 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 DDHD1Q8NEL9 900 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 ACVR1CQ8NER5 493 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 OR52E1Q8NGJ3 308 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 OR2L2Q8NH16 312 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 SPATA22Q8NHS9 363 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 FATE1Q969F0 183 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 FKBP10Q96AY3 582 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 NACC2Q96BF6 587 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 BTBD6Q96KE9 485 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 OR2A14Q96R47 310 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 ADGRE3Q9BY15 652 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 WDR54Q9H977 334 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 AMACRQ9UHK6 382 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 ICKQ9UPZ9 632 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 KLHL20Q9Y2M5 609 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 HRH3Q9Y5N1 445 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 DNMT3AQ9Y6K1 912 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 AP1M2Q9Y6Q5 423 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 ANKRD12Q6UB98 2062 aa8.13□□□□□ -1.11
HMGB1P39-201ENST00000366304 NKX2-6A6NCS4 301 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 VSTM2BA6NLU5 285 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 MATN2O00339 956 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 PRAMEF2O60811 474 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 RASAL1O95294 804 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 HPP00738 406 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 SLC35G4P0C7Q5 338 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 ATP1A3P13637 1013 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 ALAS2P22557 587 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 PDHA2P29803 388 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 PEBP1P30086 187 aaKnown RBP8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 SERPINB6P35237 376 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 OR1D4P47884 311 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 ADAM8P78325 824 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 PRKG2Q13237 762 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 RBBP7Q16576 425 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 TPD52L1Q16890 204 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 DPCR1Q3MIW9 517 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 BOLA3Q53S33 107 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 IRAK1BP1Q5VVH5 260 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 ATG9BQ674R7 924 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 TTLL10Q6ZVT0 673 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 IRF2BP2Q7Z5L9 587 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 NT5DC3Q86UY8 548 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 DOLPP1Q86YN1 238 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 LRRC49Q8IUZ0 686 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 PQLC3Q8N755 202 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 LMNTD1Q8N9Z9 388 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 DNAJB8Q8NHS0 232 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 FAM71BQ8TC56 605 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 BRSK1Q8TDC3 778 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 AGAP11Q8TF27 550 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 SDCCAG3Q96C92 435 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 IMP4Q96G21 291 aaKnown RBP8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 TTC25Q96NG3 672 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 FERD3LQ96RJ6 166 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 HES7Q9BYE0 225 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 UCK2Q9BZX2 261 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 SLC26A1Q9H2B4 701 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 OR52A5Q9H2C5 316 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 TFB2MQ9H5Q4 396 aaKnown RBP8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 RAD18Q9NS91 495 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 TXLNGQ9NUQ3 528 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 ZNF358Q9NW07 568 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 ACSL5Q9ULC5 683 aa8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 LUC7L2Q9Y383 392 aaKnown RBP8.12□□□□□ -1.11
HMGB1P39-201ENST00000366304 ZANQ9Y493 2812 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms