RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 MRASO14807 208 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 TLR5O60602 858 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SIX3O95343 332 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CR2P20023 1033 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 HSPA13P48723 471 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 FOXA1P55317 472 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CDKL1Q00532 357 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 USP41Q3LFD5 358 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 MGAT5BQ3V5L5 792 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 MBNL2Q5VZF2 373 aaKnown RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 OGFOD3Q6PK18 319 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 LRTOMTQ8WZ04 291 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 LPGAT1Q92604 370 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 IRF7Q92985 503 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 PSKH2Q96QS6 385 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CYP2S1Q96SQ9 504 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 DERL2Q9GZP9 239 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 MAGEH1Q9H213 219 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 TUBB1Q9H4B7 451 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ELAC1Q9H777 363 aaKnown RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SLC6A20Q9NP91 592 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CROTQ9UKG9 612 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 AP4S1Q9Y587 144 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ANKRD36A6QL64 1941 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 BBIP1A8MTZ0 92 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 F5H5T6 163 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 GNB5O14775 395 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 KERAO60938 352 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 PRLP01236 227 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 PIRTP0C851 137 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 PRSS56P0CW18 603 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 OXCT1P55809 520 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 GNA12Q03113 381 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SMARCB1Q12824 385 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 RALGDSQ12967 914 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 PFKFB4Q16877 469 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SAMD4BQ5PRF9 694 aaKnown RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 STK32CQ86UX6 486 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 MFN1Q8IWA4 741 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 LGI2Q8N0V4 545 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CFAP52Q8N1V2 620 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 NKAPQ8N5F7 415 aaKnown RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SNX31Q8N9S9 440 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 TWIST2Q8WVJ9 160 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 CASD1Q96PB1 797 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 TTLL2Q9BWV7 592 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 C7orf69Q9H7B7 122 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ZNF696Q9H7X3 374 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SLC52A3Q9NQ40 469 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 IFT80Q9P2H3 777 aaPredicted RBP7.2□□□□□ -1.26
CLCN3-202ENST00000360642 ABCD2Q9UBJ2 740 aa7.2□□□□□ -1.26
CLCN3-202ENST00000360642 SMIM31A0A1B0GVY4 71 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 H3BUI4 141 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 AZIN1O14977 448 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 KDELR3O43731 214 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 KLK8O60259 260 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 ATF6P18850 670 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 SLC7A1P30825 629 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 RGRP47804 291 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 ARPP19P56211 112 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 POLE2P56282 527 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 MYBPC1Q00872 1141 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 GK3PQ14409 553 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 PAQR3Q6TCH7 311 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 FAM129CQ86XR2 697 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 MDGA1Q8NFP4 955 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 C2orf15Q8WU43 125 aaKnown RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 ZNF597Q96LX8 424 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 PRICKLE1Q96MT3 831 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 SEPT5Q99719 369 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 YIPF2Q9BWQ6 316 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 C1QTNF3Q9BXJ4 246 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 SYTL2Q9HCH5 934 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 MID1IP1Q9NPA3 183 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 SDR39U1Q9NRG7 319 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 PLK2Q9NYY3 685 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 IKZF3Q9UKT9 509 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 PTGDR2Q9Y5Y4 395 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 ZFP37Q9Y6Q3 630 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 A0A0J9YYE9 177 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 A0A1B0GTL3 188 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 AQP12BA6NM10 295 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 SLC38A8A6NNN8 435 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 PIP5K1BO14986 540 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 ACSL4O60488 711 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 CLASP2O75122 1294 aaKnown RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 MATN4O95460 622 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 TFAP2AP05549 437 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 PRR35P0CG20 571 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 KIR3DL1P43629 444 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 MRPL19P49406 292 aaKnown RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 CDH4P55283 916 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 GRB7Q14451 532 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 GPNMBQ14956 572 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 TESK1Q15569 626 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 TAF1AQ15573 450 aaPredicted RBP7.19□□□□□ -1.26
CLCN3-202ENST00000360642 GAB4Q2WGN9 574 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 C3orf38Q5JPI3 329 aa7.19□□□□□ -1.26
CLCN3-202ENST00000360642 SATL1Q86VE3 508 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms