RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 MUSKO15146 869 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 PPM1BO75688 479 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 CYP7B1O75881 506 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 WISP3O95389 354 aaPredicted RBP13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 ITGB3P05106 788 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 ALAS2P22557 587 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 C21orf33P30042 268 aaPredicted RBP13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 CAP2P40123 477 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 CLCN5P51795 746 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 PWP1Q13610 501 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 PAMR1Q6UXH9 720 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 PDZD4Q76G19 769 aaPredicted RBP13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 DET1Q7L5Y6 550 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 BNIPLQ7Z465 357 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 KLHDC8BQ8IXV7 354 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 CDYL2Q8N8U2 506 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 DNASE1L2Q92874 299 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 MYDGFQ969H8 173 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 C12orf42Q96LP6 360 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 TMEM209Q96SK2 561 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 VAT1Q99536 393 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 ZC4H2Q9NQZ6 224 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 DCAF13Q9NV06 445 aaKnown RBP13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 UBP1Q9NZI7 540 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 GMEB2Q9UKD1 530 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 NEUROG3Q9Y4Z2 214 aa13.03□□□□□ -0.32
SPTSSB-201ENST00000359175 CIB4A0PJX0 185 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 CA12O43570 354 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 RETP07949 1114 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 KIAA1614Q5VZ46 1190 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 RNF130Q86XS8 419 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 CCDC71Q8IV32 467 aaPredicted RBP13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 CCDC117Q8IWD4 279 aaPredicted RBP13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 CDAN1Q8IWY9 1227 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 GPALPP1Q8IXQ4 340 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 FAM181AQ8N9Y4 354 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 CLEC4CQ8WTT0 213 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 POP5Q969H6 163 aaKnown RBP13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 WDFY2Q96P53 400 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 RAD9AQ99638 391 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 PITX2Q99697 317 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 SPNS1Q9H2V7 528 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 PSORS1C1Q9UIG5 152 aa13.02□□□□□ -0.32
SPTSSB-201ENST00000359175 COL2A1P02458 1487 aaPredicted RBP13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 MIA3Q5JRA6 1907 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 KIAA1217Q5T5P2 1943 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PCDHGA12O60330 932 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PAMP19021 973 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 HOXA9P31269 272 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PER3P56645 1201 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 OLR1P78380 273 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 KCNC3Q14003 757 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 ATP6AP1LQ52LC2 224 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 IGSF11Q5DX21 431 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 MLIPQ5VWP3 458 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 CCDC149Q6ZUS6 474 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 VSIG10LQ86VR7 867 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 NLRP8Q86W28 1048 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 TMC8Q8IU68 726 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PTGR2Q8N8N7 351 aaPredicted RBP13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PPHLN1Q8NEY8 458 aaKnown RBP13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 FAM162AQ96A26 154 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PTERQ96BW5 349 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 COQ8BQ96D53 544 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 HYLS1Q96M11 299 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 C11orf54Q9H0W9 315 aaPredicted RBP13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PLCXD1Q9NUJ7 323 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 ZNF175Q9Y473 711 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 SNX8Q9Y5X2 465 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 CXCR6O00574 342 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PDE9AO76083 593 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 ERVK-8P63133 956 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 SP4Q02446 784 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 QPRTQ15274 297 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 TAB1Q15750 504 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 GPR19Q15760 415 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 XKR7Q5GH72 579 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 KIAA0930Q6ICG6 404 aaPredicted RBP13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 TEX261Q6UWH6 196 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 RAB44Q7Z6P3 723 aaPredicted RBP13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 GPAT4Q86UL3 456 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 ZBTB44Q8NCP5 570 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 AP2M1Q96CW1 435 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 TEKT5Q96M29 485 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 MCCC2Q9HCC0 563 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 ZNF277Q9NRM2 450 aaPredicted RBP13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 TREX1Q9NSU2 369 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 VNN3Q9NY84 501 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 CSNK1G3Q9Y6M4 447 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 U3KQ87 197 aa13.02□□□□□ -0.33
SPTSSB-201ENST00000359175 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
SPTSSB-201ENST00000359175 SIX3O95343 332 aaPredicted RBP13.01□□□□□ -0.33
SPTSSB-201ENST00000359175 CDK1P06493 297 aa13.01□□□□□ -0.33
SPTSSB-201ENST00000359175 NFICP08651 508 aa13.01□□□□□ -0.33
SPTSSB-201ENST00000359175 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
SPTSSB-201ENST00000359175 KIR2DL3P43628 341 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms