RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 TUSC3Q13454 348 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 OTOP2Q7RTS6 562 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GALNT11Q8NCW6 608 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 C16orf58Q96GQ5 468 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 EPYCQ99645 322 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 IRF6O14896 467 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GPIP06744 558 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GJB1P08034 283 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MSL3P1P0C860 447 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TACR2P21452 398 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TUBG1P23258 451 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 DRG2P55039 364 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 OGFOD2Q6N063 350 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CBR4Q8N4T8 237 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NUDT15Q9NV35 164 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 DERAQ9Y315 318 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TMEM156Q8N614 296 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 OR5M3Q8NGP4 307 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 LPGAT1Q92604 370 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 DMRTB1Q96MA1 342 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 PCDH18Q9HCL0 1135 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MTMR10Q9NXD2 777 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CPS1P31327 1500 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 RP1L1Q8IWN7 2480 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MYO18AQ92614 2054 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MUSKO15146 869 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 XKP51811 444 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GTF2BQ00403 316 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC3A1Q07837 685 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 AIMP2Q13155 320 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NOGQ13253 232 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 VSIG10LQ86VR7 867 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CRTAC1Q9NQ79 661 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 HCKP08631 526 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CHIT1Q13231 466 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SERPINA9Q86WD7 417 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 PGAM4Q8N0Y7 254 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GNAO1P09471 354 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NFKB2Q00653 900 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 DSG2Q14126 1118 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 YIPF7Q8N8F6 280 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ZSCAN1Q8NBB4 408 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MAFIPQ8WZ33 124 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NDRG1Q92597 394 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GTPBP2Q9BX10 602 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GMEB2Q9UKD1 530 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CDC14AQ9UNH5 594 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TCAF1Q9Y4C2 921 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ARPC2O15144 300 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 MT-CYBP00156 380 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GADD45AP24522 165 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GLP1RP43220 463 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 BRCC3P46736 316 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CDKN1CP49918 316 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 LACTB2Q53H82 288 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TNFAIP8L2Q6P589 184 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SYCE2Q6PIF2 218 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SETD7Q8WTS6 366 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 KCTD7Q96MP8 289 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CTPS2Q9NRF8 586 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 P2RX2Q9UBL9 471 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ZFP37Q9Y6Q3 630 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SCGB2A1O75556 95 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 IFNA7P01567 189 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF12P17014 697 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 DRD4P21917 467 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GRK1Q15835 563 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC44A3Q8N4M1 653 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 JAGN1Q8N5M9 183 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SCGB1C1Q8TD33 95 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ADAP2Q9NPF8 381 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CPED1A4D0V7 1026 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CAPN8A6NHC0 703 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 A8MUA0 341 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NOBOXO60393 691 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CHRM5P08912 532 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 KLF10Q13118 480 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 THAP6Q8TBB0 222 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC7A6OSQ96CW6 309 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TMED9Q9BVK6 235 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 RUVBL1Q9Y265 456 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 LOC100509620A0A075B734 347 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 FXYD6-FXYD2A0A087WZ82 144 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TLE2Q04725 743 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 LCP2Q13094 533 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 UAP1L1Q3KQV9 507 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 YTHDF3Q7Z739 585 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC22A17Q8WUG5 538 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 YIPF4Q9BSR8 244 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 FXYD6Q9H0Q3 95 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CFL2Q9Y281 166 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 ARL5AQ9Y689 179 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 CXCR6O00574 342 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 GOT2P00505 430 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 PIM1P11309 404 aaPredicted RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 AFF1P51825 1210 aaKnown RBP5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 DGKEP52429 567 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 NT5DC1Q5TFE4 455 aa5.68□□□□□ -1.5
SRGAP1-201ENST00000355086 TNFRSF25Q93038 417 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms