RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PPP1R32Q7Z5V6 425 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 RAB43Q86YS6 212 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 TBC1D21Q8IYX1 336 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 LINC01555Q8NAE3 123 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 SSC4DQ8WTU2 575 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 TCTN2Q96GX1 697 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 ZNF778Q96MU6 729 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 CPAMD8Q8IZJ3 1885 aa15.29■□□□□ 0.04
PDGFA-201ENST00000354513 NRDCO43847 1150 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 FTCDO95954 541 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 FTH1P02794 183 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 HBQ1P09105 142 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 AGXTP21549 392 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 RRADP55042 308 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 ACVR1Q04771 509 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 SLC5A12Q1EHB4 618 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 P3H1Q32P28 736 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 PLEKHN1Q494U1 663 aaPredicted RBP15.28■□□□□ 0.04
PDGFA-201ENST00000354513 CRB2Q5IJ48 1285 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 VWA5B1Q5TIE3 1220 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 MLIPQ5VWP3 458 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 HPS6Q86YV9 775 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 ZNF655Q8N720 491 aaPredicted RBP15.28■□□□□ 0.04
PDGFA-201ENST00000354513 ATG4AQ8WYN0 398 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDGFA-201ENST00000354513 SLC7A5P2Q9GIP4 190 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 ZNF552Q9H707 407 aaPredicted RBP15.28■□□□□ 0.04
PDGFA-201ENST00000354513 ZBTB20Q9HC78 741 aaPredicted RBP15.28■□□□□ 0.04
PDGFA-201ENST00000354513 OR6C2Q9NZP2 312 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 PADI2Q9Y2J8 665 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 KLHL20Q9Y2M5 609 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 TDRKHQ9Y2W6 561 aaKnown RBP15.28■□□□□ 0.04
PDGFA-201ENST00000354513 PTRH2Q9Y3E5 179 aaKnown RBP15.28■□□□□ 0.04
PDGFA-201ENST00000354513 CROCCQ5TZA2 2017 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 CRYBG3Q68DQ2 2970 aa15.28■□□□□ 0.04
PDGFA-201ENST00000354513 ZSCAN9O15535 394 aaPredicted RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 ZNF189O75820 626 aaPredicted RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 GOT2P00505 430 aaKnown RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 CCR7P32248 378 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 CSE1LP55060 971 aaKnown RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 NAP1L1P55209 391 aaKnown RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 SSPNQ14714 243 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 OASLQ15646 514 aaKnown RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 EIF2S3LQ2VIR3 472 aaKnown RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 DCAF10Q5QP82 559 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 ZNF449Q6P9G9 518 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 PEX26Q7Z412 305 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 GPR135Q8IZ08 494 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 TTC13Q8NBP0 860 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 OR2Y1Q8NGV0 311 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 PROKR1Q8TCW9 393 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 HDAC10Q969S8 669 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 SNRNP40Q96DI7 357 aaKnown RBP15.27■□□□□ 0.04
PDGFA-201ENST00000354513 SGSM3Q96HU1 749 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 AP1M1Q9BXS5 423 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 C5AR2Q9P296 337 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 CIDEBQ9UHD4 219 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 POLG2Q9UHN1 485 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 NTNG1Q9Y2I2 539 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 CAPN6Q9Y6Q1 641 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 AP1M2Q9Y6Q5 423 aa15.27■□□□□ 0.04
PDGFA-201ENST00000354513 MDC1Q14676 2089 aaKnown RBP15.27■□□□□ 0.03
PDGFA-201ENST00000354513 QSOX1O00391 747 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 SUN1O94901 812 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 MAGP20916 626 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 CETN2P41208 172 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 FOLR3P41439 243 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 CCZ1BP86790 482 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 CCZ1P86791 482 aaPredicted RBP15.26■□□□□ 0.03
PDGFA-201ENST00000354513 MYBPC3Q14896 1274 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 KYNUQ16719 465 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 NKAIN1Q4KMZ8 207 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 C4orf17Q53FE4 359 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 TSTD2Q5T7W7 516 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 COX15Q7KZN9 410 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 SLC22A15Q8IZD6 547 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 LRRC45Q96CN5 670 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 HES6Q96HZ4 224 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 IL17FQ96PD4 163 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 RANBP9Q96S59 729 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 ETNK1Q9HBU6 452 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 SLAMF7Q9NQ25 335 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 ASF1BQ9NVP2 202 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 P4HTMQ9NXG6 502 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 CELSR2Q9HCU4 2923 aa15.26■□□□□ 0.03
PDGFA-201ENST00000354513 IQCF5A8MTL0 148 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 MIF4GDA9UHW6 222 aaKnown RBP15.25■□□□□ 0.03
PDGFA-201ENST00000354513 ISM1B1AKI9 464 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 PSMD3O43242 534 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 MAP3K7O43318 606 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 ALOX12BO75342 701 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 GPC4O75487 556 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 IPO7O95373 1038 aaKnown RBP15.25■□□□□ 0.03
PDGFA-201ENST00000354513 OR56A5P0C7T3 313 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 SOX8P57073 446 aa15.25■□□□□ 0.03
PDGFA-201ENST00000354513 DCDP81605 110 aaKnown RBP15.25■□□□□ 0.03
PDGFA-201ENST00000354513 CDH17Q12864 832 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms