RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SLC22A11Q9NSA0 550 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 ACTR10Q9NZ32 417 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 HS3ST3B1Q9Y662 390 aa15.26■□□□□ 0.03
DDX55-202ENST00000354291 TRAV17A0A0B4J275 112 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 H3BMH7 237 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 PSTPIP1O43586 416 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 CLDN14O95500 239 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 CDKN2BP42772 138 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 MAGEA1P43355 309 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 TMPRSS15P98073 1019 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 TUBB8Q3ZCM7 444 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 SARM1Q6SZW1 724 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 DAAM2Q86T65 1068 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 LILRA3Q8N6C8 439 aaPredicted RBP15.25■□□□□ 0.03
DDX55-202ENST00000354291 C19orf47Q8N9M1 422 aaKnown RBP15.25■□□□□ 0.03
DDX55-202ENST00000354291 PHC3Q8NDX5 983 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 DDHD1Q8NEL9 900 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 TADA1Q96BN2 335 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 SPOCK3Q9BQ16 436 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 TMUB1Q9BVT8 246 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.25■□□□□ 0.03
DDX55-202ENST00000354291 GLOD4Q9HC38 313 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 HYOU1Q9Y4L1 999 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 PCDHGB6Q9Y5F9 930 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 ALG6Q9Y672 507 aa15.25■□□□□ 0.03
DDX55-202ENST00000354291 PRRC2AP48634 2157 aaKnown RBP15.24■□□□□ 0.03
DDX55-202ENST00000354291 A0A0A6YYK5 440 aaPredicted RBP15.24■□□□□ 0.03
DDX55-202ENST00000354291 BUD23O43709 281 aaKnown RBP15.24■□□□□ 0.03
DDX55-202ENST00000354291 CST8O60676 142 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 F10P00742 488 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 DRD2P14416 443 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 AGAP20933 346 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 HMGCLP35914 325 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 SPAM1P38567 509 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 PRKG2Q13237 762 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 ZIC1Q15915 447 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 RBBP7Q16576 425 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 C3AR1Q16581 482 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 TAZQ16635 292 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 TFDP3Q5H9I0 405 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 TLDC1Q6P9B6 456 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 MEX3BQ6ZN04 569 aaKnown RBP15.24■□□□□ 0.03
DDX55-202ENST00000354291 OVCH1Q7RTY7 1134 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 AMIGO1Q86WK6 493 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 CCDC170Q8IYT3 715 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 SPATA22Q8NHS9 363 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 TFB1MQ8WVM0 346 aaKnown RBP15.24■□□□□ 0.03
DDX55-202ENST00000354291 P3H4Q92791 437 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDX55-202ENST00000354291 TEKT5Q96M29 485 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 SOX17Q9H6I2 414 aaPredicted RBP15.24■□□□□ 0.03
DDX55-202ENST00000354291 LUC7LQ9NQ29 371 aaKnown RBP15.24■□□□□ 0.03
DDX55-202ENST00000354291 PTGFRNQ9P2B2 879 aa15.24■□□□□ 0.03
DDX55-202ENST00000354291 ZNF469Q96JG9 3925 aaPredicted RBP15.23■□□□□ 0.03
DDX55-202ENST00000354291 GLYATL1P3A0A0U1RQE8 302 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 SLC19A2O60779 497 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 PMPCBO75439 489 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 ZRANB2O95218 330 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDX55-202ENST00000354291 NDST3O95803 873 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 CRYABP02511 175 aaKnown RBP15.23■□□□□ 0.03
DDX55-202ENST00000354291 PTPN3P26045 913 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 TNFSF10P50591 281 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 CSNK1G2P78368 415 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 NOMO1Q15155 1222 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 SPA17Q15506 151 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 NKG7Q16617 165 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 KAZNQ674X7 775 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 SPESP1Q6UW49 350 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 TTLL10Q6ZVT0 673 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 RCOR2Q8IZ40 523 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 ADGRF3Q8IZF5 1079 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 TC2NQ8N9U0 490 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 OR11G2Q8NGC1 345 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 OR52E1Q8NGJ3 308 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 ADAMTS18Q8TE60 1221 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 VPS50Q96JG6 964 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 CCM2Q9BSQ5 444 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 TFB2MQ9H5Q4 396 aaKnown RBP15.23■□□□□ 0.03
DDX55-202ENST00000354291 UBP1Q9NZI7 540 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 ABI3Q9P2A4 366 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 SAE1Q9UBE0 346 aaPredicted RBP15.23■□□□□ 0.03
DDX55-202ENST00000354291 TINAGQ9UJW2 476 aa15.23■□□□□ 0.03
DDX55-202ENST00000354291 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDX55-202ENST00000354291 WISP2O76076 250 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 RASAL1O95294 804 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 TNNT3P45378 269 aaPredicted RBP15.22■□□□□ 0.03
DDX55-202ENST00000354291 GABRA4P48169 554 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 ITGA9Q13797 1035 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 INAQ16352 499 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 ZDHHC20Q5W0Z9 365 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 FAM20CQ8IXL6 584 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 KATNAL2Q8IYT4 538 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 DNAJB8Q8NHS0 232 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 CCDC110Q8TBZ0 833 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 VAT1Q99536 393 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 MESP1Q9BRJ9 268 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 ZNF160Q9HCG1 818 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
DDX55-202ENST00000354291 IL17CQ9P0M4 197 aa15.22■□□□□ 0.03
DDX55-202ENST00000354291 FAM153AQ9UHL3 310 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms