RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CLDN2P57739 230 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 FZD5Q13467 585 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 GAS6Q14393 721 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 SQLEQ14534 574 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 CCSMST1Q4G0I0 132 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 KIAA0895LQ68EN5 471 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 OR9A1PQ8NGU1 263 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 TUBGCP3Q96CW5 907 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 SLC7A6OSQ96CW6 309 aaPredicted RBP18.17■□□□□ 0.5
PTN-201ENST00000348225 TOE1Q96GM8 510 aaKnown RBP18.17■□□□□ 0.5
PTN-201ENST00000348225 SCARF2Q96GP6 870 aaPredicted RBP18.17■□□□□ 0.5
PTN-201ENST00000348225 C3orf30Q96M34 536 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 HHIPQ96QV1 700 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 AKTIPQ9H8T0 292 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 POLG2Q9UHN1 485 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 SUFUQ9UMX1 484 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 SLC22A14Q9Y267 594 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 ASF1AQ9Y294 204 aa18.17■□□□□ 0.5
PTN-201ENST00000348225 C10orf142B7Z368 130 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 APBB3O95704 486 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 SLC16A8O95907 504 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 EZRP15311 586 aaKnown RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 LBPP18428 481 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 IMPA1P29218 277 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 CD6P30203 668 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 NUDT1P36639 197 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 ATP4BP51164 291 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 PFN3P60673 137 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 YPEL5P62699 121 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 IRX1P78414 480 aaPredicted RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 NAA25Q14CX7 972 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 ZXDCQ2QGD7 858 aaPredicted RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 GGTA1PQ4G0N0 100 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 PYCR3Q53H96 274 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 XKR7Q5GH72 579 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 RNF165Q6ZSG1 346 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 DCUN1D3Q8IWE4 304 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 OR56A3Q8NH54 315 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 PYCR2Q96C36 320 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 WDR92Q96MX6 357 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 DMTF1Q9Y222 760 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 GPSM3Q9Y4H4 160 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 PTGDR2Q9Y5Y4 395 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 HS3ST3A1Q9Y663 406 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 COPG1Q9Y678 874 aaKnown RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 PRSS38A1L453 326 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 KRT87PA6NCN2 255 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 ITPKAP23677 461 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 PIK3R1P27986 724 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 STX1BP61266 288 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 NAE1Q13564 534 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 IL27RAQ6UWB1 636 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 THOC6Q86W42 341 aaKnown RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 MYLK4Q86YV6 388 aaPredicted RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 TFGQ92734 400 aaPredicted RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 RAD51AP1Q96B01 352 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 MED8Q96G25 268 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 MARK4Q96L34 752 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 RAB3IPQ96QF0 476 aaPredicted RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 BTBD10Q9BSF8 475 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 OSGEPL1Q9H4B0 414 aa18.16■□□□□ 0.5
PTN-201ENST00000348225 C6orf106Q9H6K1 298 aaPredicted RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 WSB2Q9NYS7 404 aaPredicted RBP18.16■□□□□ 0.5
PTN-201ENST00000348225 PRAMEF26H0Y7S4 382 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 FUCA1P04066 466 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 NQO1P15559 274 aaKnown RBP18.15■□□□□ 0.5
PTN-201ENST00000348225 EPORP19235 508 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 GNPDA1P46926 289 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 FAM219BQ5XKK7 198 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 CAPN13Q6MZZ7 669 aaPredicted RBP18.15■□□□□ 0.5
PTN-201ENST00000348225 ENPP7Q6UWV6 458 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 GCNT7Q6ZNI0 430 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 SPATA19Q7Z5L4 167 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 SYTL1Q8IYJ3 562 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 KIF2BQ8N4N8 673 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 SPDYE1Q8NFV5 336 aaPredicted RBP18.15■□□□□ 0.5
PTN-201ENST00000348225 BMFQ96LC9 184 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 OR2M4Q96R27 311 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 TBC1D17Q9HA65 648 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 CARS2Q9HA77 564 aaKnown RBP18.15■□□□□ 0.5
PTN-201ENST00000348225 FGF22Q9HCT0 170 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 C2orf42Q9NWW7 574 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 THEGQ9P2T0 379 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 PSMD13Q9UNM6 376 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 RNF11Q9Y3C5 154 aa18.15■□□□□ 0.5
PTN-201ENST00000348225 GYG2O15488 501 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 UGDHO60701 494 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 KRT6AP02538 564 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 KRT6BP04259 564 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 IGHV4-34P06331 123 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 THRAP10827 490 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 IDSP22304 550 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 CPA2P48052 419 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 KRT6CP48668 564 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 CLCNKAP51800 687 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 THOP1P52888 689 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 HERC3Q15034 1050 aa18.14■□□□□ 0.49
PTN-201ENST00000348225 TCHHL1Q5QJ38 904 aaPredicted RBP18.14■□□□□ 0.49
PTN-201ENST00000348225 OGFOD2Q6N063 350 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms