RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 DBIP07108 87 aaKnown RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 SLC35G6P0C7Q6 338 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 IL7RP16871 459 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 RPA4Q13156 261 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 SEMA5AQ13591 1074 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 DSG2Q14126 1118 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 SEMA3AQ14563 771 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 AADACL2Q6P093 401 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 SPATA22Q8NHS9 363 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 C5orf34Q96MH7 638 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 MOCS1Q9NZB8 636 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 H0YAE9 185 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 HSD3B1P14060 373 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 CLCN7P51798 805 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 HADHBP55084 474 aaKnown RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 SMARCD3Q6STE5 483 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 ISOC1Q96CN7 298 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 SLC7A6OSQ96CW6 309 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 GLOD4Q9HC38 313 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 TNFRSF10DQ9UBN6 386 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 ZNF155Q12901 538 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 AIMP2Q13155 320 aaKnown RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 GIMAP5Q96F15 307 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 FUZQ9BT04 418 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 LRRN3E7EW58 273 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 PENKP01210 267 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 HOXD8P13378 290 aaPredicted RBP19.02■□□□□ 0.64
HDAC4-201ENST00000345617 NCK1P16333 377 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 LHCGRP22888 699 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 VSTM1Q6UX27 236 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 LRRN3Q9H3W5 708 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 DIP2CQ9Y2E4 1556 aa19.02■□□□□ 0.64
HDAC4-201ENST00000345617 NDST3O95803 873 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 IL7P13232 177 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 PORP16435 677 aaPredicted RBP19.02■□□□□ 0.63
HDAC4-201ENST00000345617 IL12BP29460 328 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 COL28A1Q2UY09 1125 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 CAND1Q86VP6 1230 aaKnown RBP19.02■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF781Q8N8C0 355 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 OR8D1Q8WZ84 308 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 TSSK3Q96PN8 268 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 ZACNQ401N2 412 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 MON1AQ86VX9 555 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 RAVER1Q8IY67 606 aaKnown RBP19.02■□□□□ 0.63
HDAC4-201ENST00000345617 PLEKHO2Q8TD55 490 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 XAGE5Q8WWM1 108 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 PBDC1Q9BVG4 233 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 ZFP57Q9NU63 452 aa19.02■□□□□ 0.63
HDAC4-201ENST00000345617 CFL1P23528 166 aaKnown RBP19.01■□□□□ 0.63
HDAC4-201ENST00000345617 PTPN9P43378 593 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 DUS1LQ6P1R4 473 aaKnown RBP19.01■□□□□ 0.63
HDAC4-201ENST00000345617 RGL2O15211 777 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 PPM1BO75688 479 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 BPNT1O95861 308 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 AKT2P31751 481 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 CERCAMQ5T4B2 595 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 MON1BQ7L1V2 547 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 LIX1Q8N485 282 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF717Q9BY31 904 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-201ENST00000345617 ELAC1Q9H777 363 aaKnown RBP19.01■□□□□ 0.63
HDAC4-201ENST00000345617 STARD7Q9NQZ5 370 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 C2orf71A6NGG8 1288 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 GRID2O43424 1007 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 SCGB2A1O75556 95 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 ITGB1P05556 798 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 NPTX1Q15818 432 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 RAB11FIP5Q9BXF6 653 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 OAZ3Q9UMX2 235 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 TBC1D3BA6NDS4 549 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 CDH8P55286 799 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 GPR153Q6NV75 609 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 ACTR3BQ9P1U1 418 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 TCRBV5S4A2TA0A5A2 114 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 PTGER3P43115 390 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 FKBP1CQ5VVH2 108 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 IRGQQ8WZA9 623 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 PRRG4Q9BZD6 226 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 SLIT3O75094 1523 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 LOC100130705A0A1B0GUX0 176 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 KLF11O14901 512 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 MATN4O95460 622 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 IFNA1P01562 189 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 ESR1P03372 595 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 OR2AJ1Q8NGZ0 328 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 COQ8BQ96D53 544 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 ZNF700Q9H0M5 742 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 IL25Q9H293 177 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 IPPKQ9H8X2 491 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 FANCFQ9NPI8 374 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 KIAA1522Q9P206 1035 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-201ENST00000345617 ADH6P28332 368 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 SLC1A5Q15758 541 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 VANGL1Q8TAA9 524 aaPredicted RBP19.01■□□□□ 0.63
HDAC4-201ENST00000345617 BCL7BQ9BQE9 202 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 GDAP2Q9NXN4 497 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 PCDHB9Q9Y5E1 797 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 A0A1W2PPM1 405 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 RPIAP49247 311 aa19.01■□□□□ 0.63
HDAC4-201ENST00000345617 CARTPTQ16568 116 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms