RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 SIGLEC11Q96RL6 698 aa19.74■□□□□ 0.75
UBC-201ENST00000339647 CCDC177Q9NQR7 707 aaPredicted RBP19.74■□□□□ 0.75
UBC-201ENST00000339647 PLSCR3Q9NRY6 295 aa19.74■□□□□ 0.75
UBC-201ENST00000339647 ZMYM5Q9UJ78 669 aa19.74■□□□□ 0.75
UBC-201ENST00000339647 POLR2AP24928 1970 aaKnown RBP19.74■□□□□ 0.75
UBC-201ENST00000339647 MN1Q10571 1320 aaPredicted RBP19.74■□□□□ 0.75
UBC-201ENST00000339647 A0A0U1RQS6 177 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 AREL1O15033 823 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 RPS12P25398 132 aaKnown RBP19.73■□□□□ 0.75
UBC-201ENST00000339647 CTSKP43235 329 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 AFF1P51825 1210 aaKnown RBP19.73■□□□□ 0.75
UBC-201ENST00000339647 PRKCDQ05655 676 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 AMER2Q8N7J2 671 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 BEND7Q8N7W2 519 aaPredicted RBP19.73■□□□□ 0.75
UBC-201ENST00000339647 OR4F6Q8NGB9 312 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 OR52E4Q8NGH9 312 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 CDKN2AIPNLQ96HQ2 116 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 AMBNQ9NP70 447 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 PTCH2Q9Y6C5 1203 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 HSPE1-MOB4S4R3N1 261 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 DDNO94850 711 aaPredicted RBP19.73■□□□□ 0.75
UBC-201ENST00000339647 ZNF682O95780 498 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 TSPAN12O95859 305 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 OGNP20774 298 aaKnown RBP19.73■□□□□ 0.75
UBC-201ENST00000339647 TYSND1Q2T9J0 566 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 SNAP47Q5SQN1 464 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 APH1BQ8WW43 257 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 SNX18Q96RF0 628 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 NXF2Q9GZY0 626 aaKnown RBP19.73■□□□□ 0.75
UBC-201ENST00000339647 NUAK2Q9H093 628 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 ZFP14Q9HCL3 533 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 KCNH4Q9UQ05 1017 aa19.73■□□□□ 0.75
UBC-201ENST00000339647 FZD9O00144 591 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 NIPSNAP2O75323 286 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 APOA1P02647 267 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 SERPINF2P08697 491 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 EFNA1P20827 205 aaPredicted RBP19.72■□□□□ 0.75
UBC-201ENST00000339647 LHX1P48742 406 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 PTPRNQ16849 979 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 ZNF544Q6NX49 715 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 UBQLNLQ8IYU4 475 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 CLHC1Q8NHS4 586 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 Q96MT0 163 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 ZBTB18Q99592 522 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 SEMA3CQ99985 751 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 TMEM246Q9BRR3 403 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 OR51E2Q9H255 320 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 CSNK1G1Q9HCP0 422 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 PDP1Q9P0J1 537 aaPredicted RBP19.72■□□□□ 0.75
UBC-201ENST00000339647 DKK3Q9UBP4 350 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 GPSM3Q9Y4H4 160 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 TTC3P53804 2025 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 hCG_2039718K7EN88 272 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 CDK10Q15131 360 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 TIGD6Q17RP2 521 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 BCL7AQ4VC05 210 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 SNX20Q7Z614 316 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 C3orf58Q8NDZ4 430 aa19.72■□□□□ 0.75
UBC-201ENST00000339647 FAM120BQ96EK7 910 aaKnown RBP19.72■□□□□ 0.75
UBC-201ENST00000339647 SDHCQ99643 169 aaPredicted RBP19.72■□□□□ 0.75
UBC-201ENST00000339647 PER2O15055 1255 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 MED26O95402 600 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 PGRP06401 933 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 POLR2EP19388 210 aaKnown RBP19.71■□□□□ 0.75
UBC-201ENST00000339647 DEFA1P59665 94 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 DEFA3P59666 94 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 ZFP69Q49AA0 526 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 ALFQ53S48 1182 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 PIK3R6Q5UE93 754 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 GALNT10Q86SR1 603 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 TSPYL5Q86VY4 417 aaPredicted RBP19.71■□□□□ 0.75
UBC-201ENST00000339647 LINGO1Q96FE5 620 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 NEDD4LQ96PU5 975 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 DEPDC7Q96QD5 511 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 C1orf109Q9NX04 203 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 ERVK13-1Q9NX77 482 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 ERVW-1Q9UQF0 538 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 OR7A17O14581 309 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 OR1I1O60431 355 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 SEC22BO75396 215 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 NDUFS3O75489 264 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 OR2T5Q6IEZ7 315 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 GALNT12Q8IXK2 581 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 OR2T29Q8NH02 315 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 ST6GAL2Q96JF0 529 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 TTYH2Q9BSA4 534 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 COPS4Q9BT78 406 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 GABARAPL1Q9H0R8 117 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 TMLHEQ9NVH6 421 aa19.71■□□□□ 0.75
UBC-201ENST00000339647 WBP11Q9Y2W2 641 aaKnown RBP19.71■□□□□ 0.75
UBC-201ENST00000339647 MUSKO15146 869 aa19.7■□□□□ 0.74
UBC-201ENST00000339647 ALX3O95076 343 aa19.7■□□□□ 0.74
UBC-201ENST00000339647 B3GALT4O96024 378 aa19.7■□□□□ 0.74
UBC-201ENST00000339647 RPP38P78345 283 aaKnown RBP19.7■□□□□ 0.74
UBC-201ENST00000339647 HMGCS1Q01581 520 aa19.7■□□□□ 0.74
UBC-201ENST00000339647 CHRNEQ04844 493 aa19.7■□□□□ 0.74
UBC-201ENST00000339647 ZCCHC8Q6NZY4 707 aaKnown RBP19.7■□□□□ 0.74
UBC-201ENST00000339647 AGMOQ6ZNB7 445 aa19.7■□□□□ 0.74
UBC-201ENST00000339647 Q6ZPB1 254 aaPredicted RBP19.7■□□□□ 0.74
UBC-201ENST00000339647 MILR1Q7Z6M3 343 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms