RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 LINC01555Q8NAE3 123 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.77□□□□□ -0.05
PRKN-201ENST00000338468 NLGN4YQ8NFZ3 816 aaPredicted RBP14.77□□□□□ -0.05
PRKN-201ENST00000338468 CFAP61Q8NHU2 1237 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 ZNF501Q96CX3 271 aaPredicted RBP14.77□□□□□ -0.05
PRKN-201ENST00000338468 TRAPPC9Q96Q05 1148 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 OR2A14Q96R47 310 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 SLC30A3Q99726 388 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 ULBP3Q9BZM4 244 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 FAM117AQ9C073 453 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 FGF21Q9NSA1 209 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 CIDEBQ9UHD4 219 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 PCDHGA4Q9Y5G9 962 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 PIPSLA2A3N6 862 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 KRT87PA6NCN2 255 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 C2orf74A8MZ97 194 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 H3BMM5 538 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 KPNA5O15131 536 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 KIAA0754O94854 1291 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 UGT2B7P16662 529 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 CDH3P22223 829 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 MAP4P27816 1152 aaKnown RBP14.76□□□□□ -0.05
PRKN-201ENST00000338468 PKLRP30613 574 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 CASQ1P31415 396 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 RPL21P46778 160 aaKnown RBP14.76□□□□□ -0.05
PRKN-201ENST00000338468 CLCN7P51798 805 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 ACY1Q03154 408 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 MAP7Q14244 749 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 BBS9Q3SYG4 887 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 CCSMST1Q4G0I0 132 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 ACSBG2Q5FVE4 666 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 SPESP1Q6UW49 350 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 TRIM73Q86UV7 250 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 PPP1R3BQ86XI6 285 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 DCUN1D3Q8IWE4 304 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 IL22RA1Q8N6P7 574 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 GALNT6Q8NCL4 622 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 SPATA4Q8NEY3 305 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 GIMAP7Q8NHV1 300 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 IL17FQ96PD4 163 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 TRIM31Q9BZY9 425 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 KLHL25Q9H0H3 589 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 OR6C2Q9NZP2 312 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 FBXO5Q9UKT4 447 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 BOD1L1Q8NFC6 3051 aa14.76□□□□□ -0.05
PRKN-201ENST00000338468 UBR5O95071 2799 aaPredicted RBP14.75□□□□□ -0.05
PRKN-201ENST00000338468 PFDN6O15212 129 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 HAUS5O94927 633 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 MATN4O95460 622 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 C1orf105O95561 183 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 ERVK-10P10266 1014 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 CHRM3P20309 590 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 GABRB3P28472 473 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 ATP5DP30049 168 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 ELK3P41970 407 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 STAT5AP42229 794 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 BDKRB1P46663 353 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 ARL4DP49703 201 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 RAB28P51157 221 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 TUBB4BP68371 445 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 TIAL1Q01085 375 aaKnown RBP eCLIP14.75□□□□□ -0.05
PRKN-201ENST00000338468 ABHD18Q0P651 414 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 NFATC3Q12968 1075 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 TUBB2AQ13885 445 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 ZIC1Q15915 447 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 SPANXN3Q5MJ09 141 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 HP1BP3Q5SSJ5 553 aaPredicted RBP14.75□□□□□ -0.05
PRKN-201ENST00000338468 CNSTQ6PJW8 725 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 KCNMB4Q86W47 210 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 RASGRP3Q8IV61 690 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 LMNTD2Q8IXW0 634 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 ZBTB2Q8N680 514 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 SNF8Q96H20 258 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 TUBB2BQ9BVA1 445 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 SLC12A9Q9BXP2 914 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 PDE7BQ9NP56 450 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 IARS2Q9NSE4 1012 aaKnown RBP14.75□□□□□ -0.05
PRKN-201ENST00000338468 SOHLH2Q9NX45 425 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 IL17BQ9UHF5 180 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 RARRES3Q9UL19 164 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 VPS9D1Q9Y2B5 631 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 SNX24Q9Y343 169 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 TEX264Q9Y6I9 313 aa14.75□□□□□ -0.05
PRKN-201ENST00000338468 SNRNP200O75643 2136 aaKnown RBP14.74□□□□□ -0.05
PRKN-201ENST00000338468 EFCAB8A8MWE9 144 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 TERTO14746 1132 aaKnown RBP14.74□□□□□ -0.05
PRKN-201ENST00000338468 HCRTR1O43613 425 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 TTC4O95801 387 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 RPN2P04844 631 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 F8A1P23610 371 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 CYP4F2P78329 520 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 C2orf54Q08AI8 447 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 PRAMEF17Q5VTA0 474 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 C6orf15Q6UXA7 325 aaPredicted RBP14.74□□□□□ -0.05
PRKN-201ENST00000338468 CDHR3Q6ZTQ4 885 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 BPHLQ86WA6 291 aaPredicted RBP14.74□□□□□ -0.05
PRKN-201ENST00000338468 CNTN4Q8IWV2 1026 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 FAM20CQ8IXL6 584 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
PRKN-201ENST00000338468 C2orf73Q8N5S3 287 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms