RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SPATA31C2B4DYI2 1134 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 PPP6CO00743 305 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 AP3D1O14617 1153 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 FHP07954 510 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 PTGR1Q14914 329 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 SLC10A6Q3KNW5 377 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 PAGE3Q5JUK9 113 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 SLC27A1Q6PCB7 646 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 TXNDC11Q6PKC3 985 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 OR13C4Q8NGS5 318 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CYP2S1Q96SQ9 504 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 SPIN1Q9Y657 262 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 TRAV6A0A075B6T7 132 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 PAGE1O75459 146 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CKMT1AP12532 417 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 LEPRP48357 1165 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 RFX3P48380 749 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 AGTR2P50052 363 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 APLP1P51693 650 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 GANABQ14697 944 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 KIAA0930Q6ICG6 404 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CXorf57Q6NSI4 855 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 SYVN1Q86TM6 617 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 RETREG3Q86VR2 466 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 RHOXF1Q8NHV9 184 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF675Q8TD23 568 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CTRCQ99895 268 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 F5H5T6 163 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 FPGTO14772 594 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 MSCO60682 206 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 USP2O75604 605 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF806P0C7X5 589 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 KCNA5P22460 613 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 WARSP23381 471 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 PBLDP30039 288 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 RECQLP46063 649 aaPredicted RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ST3GAL4Q11206 333 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CCDC58Q4VC31 144 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 USP39Q53GS9 565 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF484Q5JVG2 852 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF678Q5SXM1 525 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 SDHAF4Q5VUM1 108 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 MSANTD2Q6P1R3 559 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 C15orf39Q6ZRI6 1047 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 HFE2Q6ZVN8 426 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 LAPTM4BQ86VI4 370 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ELMOD1Q8N336 334 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 METTL4Q8N3J2 472 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 MINDY1Q8N5J2 469 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 TP53INP1Q96A56 240 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 DUSP16Q9BY84 665 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 MKRN2Q9H000 416 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 VRTNQ9H8Y1 702 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 MYH9P35579 1960 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 E9PAM4 449 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 PPEF2O14830 753 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CD72P21854 359 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CSTF1Q05048 431 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CNTN1Q12860 1018 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 DSC3Q14574 896 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 GRIK4Q16099 956 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ATAD3CQ5T2N8 411 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 SIDT2Q8NBJ9 832 aaKnown RBP12.99□□□□□ -0.33
COL2A1-201ENST00000337299 STRA6Q9BX79 667 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 CLCA2Q9UQC9 943 aa12.99□□□□□ -0.33
COL2A1-201ENST00000337299 ECI2O75521 394 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 POMCP01189 267 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 C7P10643 843 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 PKMP14618 531 aaKnown RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ARRB2P32121 409 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 MC4RP32245 332 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF132P52740 706 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 TMEM199Q8N511 208 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 MEIOBQ8N635 442 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 CHDHQ8NE62 594 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ARNTL2Q8WYA1 636 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 SMG7Q92540 1137 aaKnown RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 FBXO32Q969P5 355 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 SMARCD1Q96GM5 515 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 DPCDQ9BVM2 203 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 FAM83DQ9H4H8 585 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 GPN2Q9H9Y4 310 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 RANGRFQ9HD47 186 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 LTB4R2Q9NPC1 389 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 INTS6Q9UL03 887 aaKnown RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 LRRC37A3O60309 1634 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ISM1B1AKI9 464 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 SLC28A1O00337 649 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 HSD17B1P14061 328 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 EPORP19235 508 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 OR1G1P47890 313 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 KIAA1614Q5VZ46 1190 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 STEAP4Q687X5 459 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 NRARPQ7Z6K4 114 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ADAMTSL2Q86TH1 951 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 NOXA1Q86UR1 476 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 RTL3Q8N8U3 475 aaKnown RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ABHD16BQ9H3Z7 469 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 SAV1Q9H4B6 383 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms