RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 MYO19Q96H55 970 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SALL4Q9UJQ4 1053 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 MRTO4Q9UKD2 239 aaKnown RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SLC35F4A4IF30 521 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ARL5CA6NH57 179 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 INMT-MINDY4F8WBC2 141 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 DLGAP1O14490 977 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 PRKCHP24723 683 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 CDKN2BP42772 138 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SLC3A1Q07837 685 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 AIMP2Q13155 320 aaKnown RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ARFRP1Q13795 201 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF181Q2M3W8 571 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ALG1LQ6GMV1 187 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ARL9Q6T311 187 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 FNDC8Q8TC99 324 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 MIPEPQ99797 713 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 TUBA1CQ9BQE3 449 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 OXCT2Q9BYC2 517 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SDCBP2Q9H190 292 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 USP29Q9HBJ7 922 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 TMEM9Q9P0T7 183 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 PTBP2Q9UKA9 531 aaKnown RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ELOA3DA6NLF2 546 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 CENPBD1B2RD01 187 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 MATN1P21941 496 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ELOA3BQ3SY89 546 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 HGSNATQ68CP4 663 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 XYLT1Q86Y38 959 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ELOA3Q8NG57 546 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 OR6K6Q8NGW6 343 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 KLHL6Q8WZ60 621 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 MFSD3Q96ES6 412 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF641Q96N77 438 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 PURBQ96QR8 312 aaKnown RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 MIOSQ9NXC5 875 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 FZD1Q9UP38 647 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ALKQ9UM73 1620 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 NUAK1O60285 661 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SNAPC5O75971 98 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 OR2B3O76000 313 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 MATN4O95460 622 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 EEFSECP57772 596 aaKnown RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SCARB2Q14108 478 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 FAM124AQ86V42 546 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SLC15A3Q8IY34 581 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 LGI4Q8N135 537 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SCGB3A2Q96PL1 93 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 KCNQ5Q9NR82 932 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 C14orf119Q9NWQ9 140 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 FFAR2O15552 330 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 GCATO75600 419 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 PVALBP20472 110 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 CCDC58Q4VC31 144 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SIDT2Q8NBJ9 832 aaKnown RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 OR6K2Q8NGY2 324 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 SLC16A10Q8TF71 515 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 LRRC58Q96CX6 371 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ABCG4Q9H172 646 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 KCNMB3Q9NPA1 279 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 GSKIPQ9P0R6 139 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 ABCD2Q9UBJ2 740 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 CNTN6Q9UQ52 1028 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 TCAF1Q9Y4C2 921 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 DDTLA6NHG4 134 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PRAMEF12O95522 483 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 AP2A1O95782 977 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF823P16415 610 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 EPCAMP16422 314 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 SLC10A7Q0GE19 358 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 RAB39AQ14964 217 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZACNQ401N2 412 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 KRBOX4Q5JUW0 171 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 MED27Q6P2C8 311 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CHERPQ8IWX8 916 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PLD5Q8N7P1 536 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZSCAN1Q8NBB4 408 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 SNIP1Q8TAD8 396 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PLEKHO2Q8TD55 490 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PRMT6Q96LA8 375 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 LYARQ9NX58 379 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 GLYATL1P3A0A0U1RQE8 302 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF878C9JN71 531 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PRPS2P11908 318 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PPM1AP35813 382 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 OR12D2P58182 307 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF45Q02386 682 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 DSC3Q14574 896 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 SLC9A9Q8IVB4 645 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 LRRC57Q8N9N7 239 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 JPH3Q8WXH2 748 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 KREMEN1Q96MU8 473 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 MYOCQ99972 504 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 NANSQ9NR45 359 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 HCN3Q9P1Z3 774 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 POFUT2Q9Y2G5 429 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CCL22O00626 93 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms