RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ASB8Q9H765 288 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 TMEFF2Q9UIK5 374 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 BAG5Q9UL15 447 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 SH3GLB1Q9Y371 365 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 C2orf78A6NCI8 922 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CFAP99D6REC4 459 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 SLC1A7O00341 560 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 PFDN6O15212 129 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CLDN11O75508 207 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CREG1O75629 220 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 TACR1P25103 407 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 PSMA3P25788 255 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 TPP2P29144 1249 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 MAP2K4P45985 399 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CCL23P55773 120 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 RELAQ04206 551 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 FPGSQ05932 587 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CACNG1Q06432 222 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CBX3Q13185 183 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 RAPSNQ13702 412 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 RBM48Q5RL73 367 aaKnown RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 GRAMD4Q6IC98 578 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 NCEH1Q6PIU2 408 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF551Q7Z340 670 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 PAF1Q8N7H5 531 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 TERB1Q8NA31 727 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF296Q8WUU4 475 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 BCL7CQ8WUZ0 217 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 PPP3R2Q96LZ3 170 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 ZBTB18Q99592 522 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 TMEM175Q9BSA9 504 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 ALOXE3Q9BYJ1 711 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 TRNAU1APQ9NX07 287 aaKnown RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 LHX3Q9UBR4 397 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 AFF4Q9UHB7 1163 aaKnown RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 EIF3LQ9Y262 564 aaKnown RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 MYOFQ9NZM1 2061 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 ILVBLA1L0T0 632 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 ULK1O75385 1050 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 RAD23AP54725 363 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 RHOAP61586 193 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 ILF2Q12905 390 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 ARHGEF7Q14155 803 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 RUNDC3AQ59EK9 446 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 PERM1Q5SV97 790 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 CES5AQ6NT32 575 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 RBM12BQ8IXT5 1001 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 MICU2Q8IYU8 434 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 NRBF2Q96F24 287 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 EGLN2Q96KS0 407 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 CCDC115Q96NT0 180 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 TSSK3Q96PN8 268 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 KAT8Q9H7Z6 458 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 GPN2Q9H9Y4 310 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 LRTM1Q9HBL6 345 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 OPTCQ9UBM4 332 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 VPS4AQ9UN37 437 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 TRIM17Q9Y577 477 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 TNPO3Q9Y5L0 923 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 ANAPC1Q9H1A4 1944 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 DYTNA2CJ06 578 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 SMAD6O43541 496 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 RGS14O43566 566 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 CBFA2T3O75081 653 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 SULT1C4O75897 302 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 CLDN7O95471 211 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 BCKDHAP12694 445 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 ALDH7A1P49419 539 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 KPNA1P52294 538 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 IL5RAQ01344 420 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 TCTN1Q2MV58 587 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 DEFB128Q7Z7B8 93 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 DCP2Q8IU60 420 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 CHPFQ8IZ52 775 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 TMCO5AQ8N6Q1 288 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 PJA1Q8NG27 643 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 C2orf15Q8WU43 125 aaKnown RBP12.04□□□□□ -0.48
VPS33B-201ENST00000333371 FAM210AQ96ND0 272 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 FEM1AQ9BSK4 669 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 LATS2Q9NRM7 1088 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 SCN8AQ9UQD0 1980 aa12.04□□□□□ -0.48
VPS33B-201ENST00000333371 A0A1B0GVM2 712 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF840PA6NDX5 716 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 H7C0S8 307 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 HPRP00739 348 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 PCMT1P22061 227 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 FUT4P22083 530 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 EPHA2P29317 976 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 TGFBR1P36897 503 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 GNPDA1P46926 289 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 RXRGP48443 463 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 CD97P48960 835 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 BCAP31P51572 246 aa12.03□□□□□ -0.48
VPS33B-201ENST00000333371 PRMT2P55345 433 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms