RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 TXNDC8Q6A555 127 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 ZNF773Q6PK81 442 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 SUSD1Q6UWL2 747 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 ISLR2Q6UXK2 745 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 RALGPS2Q86X27 583 aaPredicted RBP10.5□□□□□ -0.73
CCDC172-201ENST00000333254 ZSWIM9Q86XI8 627 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 EID3Q8N140 333 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 ELMOD1Q8N336 334 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 GAB3Q8WWW8 586 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 HDAC2Q92769 488 aaKnown RBP10.5□□□□□ -0.73
CCDC172-201ENST00000333254 TMIGD2Q96BF3 282 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 SDCCAG3Q96C92 435 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 ISOC1Q96CN7 298 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 FBXL20Q96IG2 436 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 ITCHQ96J02 903 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 APOL5Q9BWW9 433 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 PAIP1Q9H074 479 aaKnown RBP10.5□□□□□ -0.73
CCDC172-201ENST00000333254 TNKS2Q9H2K2 1166 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 KAT8Q9H7Z6 458 aaKnown RBP10.5□□□□□ -0.73
CCDC172-201ENST00000333254 TLR9Q9NR96 1032 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 RAD18Q9NS91 495 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 DCAF13Q9NV06 445 aaKnown RBP10.5□□□□□ -0.73
CCDC172-201ENST00000333254 SLC25A37Q9NYZ2 338 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 INTS6Q9UL03 887 aaKnown RBP10.5□□□□□ -0.73
CCDC172-201ENST00000333254 USP22Q9UPT9 525 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 MAPRE3Q9UPY8 281 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 PDE10AQ9Y233 779 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 PTPRSQ13332 1948 aa10.5□□□□□ -0.73
CCDC172-201ENST00000333254 TRAV19A0A0A6YYK7 116 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 A0A0U1RQS6 177 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ABHD14A-ACY1A0A1B0GW23 586 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 KLHL33A6NCF5 533 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 C16orf96A6NNT2 1141 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 SOBPA7XYQ1 873 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 GFYI3L273 518 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 QSOX1O00391 747 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 CXCR6O00574 342 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 GSTA4O15217 222 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 PQBP1O60828 265 aaKnown RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 SEC22BO75396 215 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 AP2A2O94973 939 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 POP4O95707 220 aaKnown RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 NELFEP18615 380 aaKnown RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 NFKBIAP25963 317 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 GABRR2P28476 465 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 MAGEA2P43356 314 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 MAPK9P45984 424 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 TRPC1P48995 793 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 RPIAP49247 311 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 CDH15P55291 814 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 MTAPQ13126 283 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 TOP3AQ13472 1001 aaPredicted RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 DGKKQ5KSL6 1271 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 LRRC66Q68CR7 880 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 GAREM2Q75VX8 874 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ZDHHC13Q8IUH4 622 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 CROCCP3Q8IVE0 287 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ADHFE1Q8IWW8 467 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 TMEM132CQ8N3T6 1108 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ZCCHC7Q8N3Z6 543 aaKnown RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 BEND7Q8N7W2 519 aaPredicted RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ASB11Q8WXH4 323 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 REXO5Q96IC2 774 aaKnown RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 MAGED4Q96JG8 741 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 RBM4BQ9BQ04 359 aaKnown RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 RBM4Q9BWF3 364 aaKnown RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ACPTQ9BZG2 426 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 GABARAPL1Q9H0R8 117 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ACTR8Q9H981 624 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 SERHLQ9NQF3 203 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 HPS4Q9NQG7 708 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 CFAP97Q9P2B7 532 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 IFT80Q9P2H3 777 aaPredicted RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ADGRE2Q9UHX3 823 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 ZMYM5Q9UJ78 669 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 GMEB1Q9Y692 573 aa10.49□□□□□ -0.73
CCDC172-201ENST00000333254 TSPAN11A1L157 253 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 GRM6O15303 877 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 EFCAB14O75071 495 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 FKTNO75072 461 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 CKMP06732 381 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 ITGB6P18564 788 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 CYP2A7P20853 494 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 PTPN6P29350 595 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 CD70P32970 193 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 MTHFRP42898 656 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 SPINT3P49223 89 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
CCDC172-201ENST00000333254 POLR2LP62875 67 aaKnown RBP10.48□□□□□ -0.73
CCDC172-201ENST00000333254 B4GALNT1Q00973 533 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 CSTF3Q12996 717 aaKnown RBP10.48□□□□□ -0.73
CCDC172-201ENST00000333254 DEFB115Q30KQ5 88 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 CARD16Q5EG05 197 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 BROXQ5VW32 411 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 TBPL2Q6SJ96 375 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 CCDC149Q6ZUS6 474 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 THAP5Q7Z6K1 395 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 TSPAN33Q86UF1 283 aa10.48□□□□□ -0.73
CCDC172-201ENST00000333254 BBS7Q8IWZ6 715 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms