RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 CSTF2P33240 577 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLN8-201ENST00000331222 RPL6Q02878 288 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 AUHQ13825 339 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 RBM39Q14498 530 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 ZNF782Q6ZMW2 699 aaPredicted RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 ARL8BQ9NVJ2 186 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SMIM35A0A1B0GVV1 85 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 GADD45GO95257 159 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 CYP17A1P05093 508 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SRCP12931 536 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 EDNRAP25101 427 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 ATP6V0D1P61421 351 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SRYQ05066 204 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SEMA3AQ14563 771 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 GRM3Q14832 879 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 RAB39AQ14964 217 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 QPCTQ16769 361 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 GXYLT1Q4G148 440 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 CRTC2Q53ET0 693 aaPredicted RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 TEX44Q53QW1 395 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 TMEM126BQ8IUX1 230 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SNX7Q9UNH6 387 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLN8-201ENST00000331222 SMIM28A0A1B0GU29 152 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SLC30A4O14863 429 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 MUSKO15146 869 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 POP4O95707 220 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 PLATP00750 562 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 CLCQ05315 142 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 BRMS1LQ5PSV4 323 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 PLA2G15Q8NCC3 412 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 GPR20Q99678 358 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 BARD1Q99728 777 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 LGR4Q9BXB1 951 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 TRNAU1APQ9NX07 287 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 ZNF69Q9UC07 566 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 C13orf42A0A1B0GVH6 325 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 PIP5K1BO14986 540 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 USP2O75604 605 aaPredicted RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 JUNP05412 331 aaKnown RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 HCKP08631 526 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 HLA-EP13747 358 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 CHRNA4P43681 627 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 ZNF548Q8NEK5 533 aaPredicted RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 LRTOMTQ8WZ04 291 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 KLHL6Q8WZ60 621 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 EZH1Q92800 747 aaPredicted RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 PCDHB1Q9Y5F3 818 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 PEX12O00623 359 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 DHFRP00374 187 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 MAGEA12P43365 314 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 C1orf189Q5VU69 101 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 NPAS4Q8IUM7 802 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 OR4K17Q8NGC6 315 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 MMABQ96EY8 250 aaPredicted RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 STRA6Q9BX79 667 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 ZNF350Q9GZX5 532 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 LRRC4CQ9HCJ2 640 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 KCNS2Q9ULS6 477 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 USP32Q8NFA0 1604 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 REREQ9P2R6 1566 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 SMPD1P17405 629 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 CLCNKAP51800 687 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 OCLNQ16625 522 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 FAM174BQ3ZCQ3 159 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 ASB18Q6ZVZ8 466 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 CYP2U1Q7Z449 544 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 OR8S1Q8NH09 359 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 PXYLP1Q8TE99 480 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 AENQ8WTP8 325 aaKnown RBP10.37□□□□□ -0.75
CLN8-201ENST00000331222 SLC39A3Q9BRY0 314 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 FKBP14Q9NWM8 211 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 AGLP35573 1532 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 PLD2O14939 933 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 RGS10O43665 173 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 MMP20O60882 483 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 C2P06681 752 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 THRBP10828 461 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 TTKP33981 857 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 BDKRB1P46663 353 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 RGS19P49795 217 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 FPGSQ05932 587 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 BNIP3Q12983 259 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 PDE12Q6L8Q7 609 aaKnown RBP10.37□□□□□ -0.75
CLN8-201ENST00000331222 ILDR1Q86SU0 546 aaPredicted RBP10.37□□□□□ -0.75
CLN8-201ENST00000331222 AIFM2Q9BRQ8 373 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 ANKHQ9HCJ1 492 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 KCNMB3Q9NPA1 279 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 AURKAO14965 403 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 RB1P06400 928 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 CFL1P23528 166 aaKnown RBP10.37□□□□□ -0.75
CLN8-201ENST00000331222 SLC5A9Q2M3M2 681 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 SLC25A25Q6KCM7 469 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 GPR153Q6NV75 609 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 TRMT10AQ8TBZ6 339 aaKnown RBP10.37□□□□□ -0.75
CLN8-201ENST00000331222 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 FGFBP2Q9BYJ0 223 aa10.37□□□□□ -0.75
CLN8-201ENST00000331222 PDZD7Q9H5P4 517 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms