RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 PCDHGB3Q9Y5G1 929 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LOC100130705A0A1B0GUX0 176 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PRMT2P55345 433 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 DYRK1AQ13627 763 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NTRK3Q16288 839 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ARL9Q6T311 187 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF101Q8IZC7 436 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CNTD1Q8N815 330 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ANKRD52Q8NB46 1076 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 BSNDQ8WZ55 320 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC41A3Q96GZ6 507 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 IL1RAPQ9NPH3 570 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TCAF2A6NFQ2 919 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SFTPBP07988 381 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CBX2Q14781 532 aaPredicted RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RAVER1Q8IY67 606 aaKnown RBP12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 C16orf58Q96GQ5 468 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MYOZ2Q9NPC6 264 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PIP5K1BO14986 540 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF20P17024 532 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 APLP1P51693 650 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PCBP2Q15366 365 aaKnown RBP eCLIP12.54□□□□□ -0.41e-7■■■□□ 14.9
RAB11FIP1-202ENST00000330843 SLC9B1Q4ZJI4 515 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OR10Q1Q8NGQ4 319 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SUSD6Q92537 303 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC39A8Q9C0K1 460 aa12.54□□□□□ -0.4
RAB11FIP1-202ENST00000330843 INSRRP14616 1297 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GLDCP23378 1020 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NOMO3P69849 1222 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NOMO1Q15155 1222 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HFE2Q6ZVN8 426 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 C4orf19Q8IY42 314 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OR5T2Q8NGG2 359 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MAELQ96JY0 434 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 YIPF4Q9BSR8 244 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HTATIP2Q9BUP3 242 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SH2B3Q9UQQ2 575 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TSPAN15O95858 294 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CH25HO95992 272 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GSTT2P0CG29 244 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PRKCAP17252 672 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RNF4P78317 190 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SDHAF4Q5VUM1 108 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FCGR1BQ92637 280 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF282Q9UDV7 671 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PCDHB12Q9Y5F1 795 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NCANO14594 1321 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TRBV23OR9-2A0A075B6M9 112 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 F8W036 122 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CLDN9O95484 217 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HOXB8P17481 243 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CD97P48960 835 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 BLOC1S1P78537 153 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 OR6C4Q8NGE1 309 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TERB2Q8NHR7 220 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SLC38A4Q969I6 547 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 AGAP2Q99490 1192 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HEPHQ9BQS7 1158 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CDT1Q9H211 546 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PPIL3Q9H2H8 161 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GDAP2Q9NXN4 497 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 LCHNA4D1U4 455 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 H3BRB1 525 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CACNB4O00305 520 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CKMT2P17540 419 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 RXRBP28702 533 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 NRLP54845 237 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FAM174BQ3ZCQ3 159 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 XKR4Q5GH76 650 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 TMC8Q8IU68 726 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 BOLLQ8N9W6 283 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 COPZ2Q9P299 210 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 CD84Q9UIB8 345 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 A0A1W2PRQ8 180 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PTNP21246 168 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 KLRK1P26718 216 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ATP5C1P36542 298 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 FXYD6P3P58550 94 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PRPF38BQ5VTL8 546 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 METTL21CQ5VZV1 264 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 METTL25Q8N6Q8 603 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 SPATA9Q9BWV2 254 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ITPAQ9BY32 194 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 EIF1AYO14602 144 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ALOX15BO15296 676 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 ENTPD6O75354 484 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 PORP16435 677 aaPredicted RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 MATN1P21941 496 aa12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
RAB11FIP1-202ENST00000330843 HUNKP57058 714 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms