RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 CCL26Q9Y258 94 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 QSOX1O00391 747 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 ZNF8P17098 575 aaPredicted RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 PRDX6P30041 224 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 HMGCLP35914 325 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 BUD31P41223 144 aaPredicted RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 MS4A2Q01362 244 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 ILF2Q12905 390 aaKnown RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 MADCAM1Q13477 382 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 HID1Q8IV36 788 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 TBC1D21Q8IYX1 336 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 OR4K1Q8NGD4 311 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 WFDC5Q8TCV5 224 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 MZB1Q8WU39 189 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 C3orf30Q96M34 536 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 RAD9AQ99638 391 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 KXD1Q9BQD3 176 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 HTATIP2Q9BUP3 242 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 KRT84Q9NSB2 600 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 FARSBQ9NSD9 589 aaKnown RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 GMPR2Q9P2T1 348 aaKnown RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 OGDHLQ9ULD0 1010 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 PHF24Q9UPV7 400 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 TESMINQ9Y4I5 508 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 CACNB4O00305 520 aaPredicted RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 KDM1AO60341 852 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 PRKD3O94806 890 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 SERPINA1P01009 418 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 IFNA14P01570 189 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 FSHRP23945 695 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 HOXD9P28356 352 aaPredicted RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 WDR5P61964 334 aaKnown RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 ARF5P84085 180 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 SPIBQ01892 262 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 ABRAXAS2Q15018 415 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 CYP27C1Q4G0S4 372 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 KCTD11Q693B1 232 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 MED27Q6P2C8 311 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 AGTRAPQ6RW13 159 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 AMZ2Q86W34 360 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 TOP1MTQ969P6 601 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 FUBP1Q96AE4 644 aaKnown RBP11.57□□□□□ -0.56
DDR1-223ENST00000324771 CGREF1Q99674 301 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 OSBPL11Q9BXB4 747 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 SLC32A1Q9H598 525 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 RAD18Q9NS91 495 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 ELOVL2Q9NXB9 296 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 SHROOM3Q8TF72 1996 aa11.57□□□□□ -0.56
DDR1-223ENST00000324771 SUV39H1O43463 412 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 CHRM5P08912 532 aaPredicted RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 ALPPL2P10696 532 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 SRCP12931 536 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 CENPAP49450 140 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 CCR4P51679 360 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 ERVK-21P61565 698 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 TMEM115Q12893 351 aaPredicted RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 ATP1A4Q13733 1029 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 INO80DQ53TQ3 878 aaPredicted RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 C9orf64Q5T6V5 341 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 FRG2Q64ET8 278 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 PDE12Q6L8Q7 609 aaKnown RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 BCL7CQ8WUZ0 217 aaPredicted RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 FRG2BQ96QU4 278 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 DPEP2Q9H4A9 486 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 XKR8Q9H6D3 395 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 MAGEL2Q9UJ55 1249 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 C3orf18Q9UK00 162 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 DFNA5O60443 496 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 IL6P05231 212 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 CST5P28325 142 aaPredicted RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 MTTPP55157 894 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 IER5LQ5T953 404 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 SLC8B1Q6J4K2 584 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 NCEH1Q6PIU2 408 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 ABRAXAS1Q6UWZ7 409 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 PHF10Q8WUB8 498 aaKnown RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 NSMCE3Q96MG7 304 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 PHF12Q96QT6 1004 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 EURLQ9NYK6 297 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 USE1Q9NZ43 259 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 NDUFA13Q9P0J0 144 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 PDP1Q9P0J1 537 aaPredicted RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 IL17CQ9P0M4 197 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 ARCN1P48444 511 aaKnown RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 PATL1Q86TB9 770 aaKnown RBP11.56□□□□□ -0.56
DDR1-223ENST00000324771 ZNF540Q8NDQ6 660 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 HERVK_113Q902F9 699 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 RAD51AP1Q96B01 352 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 NUS1Q96E22 293 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 VPS35Q96QK1 796 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 MGME1Q9BQP7 344 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 C1QTNF7Q9BXJ2 289 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 TREX1Q9NSU2 369 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 TMCO1Q9UM00 188 aa11.56□□□□□ -0.56
DDR1-223ENST00000324771 CXCR6O00574 342 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 SLC28A2O43868 658 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 OR10H3O60404 316 aa11.55□□□□□ -0.56
DDR1-223ENST00000324771 PGRP06401 933 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms