RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TRIM24O15164 1050 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 GRID2O43424 1007 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SNAPINO95295 136 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 NTRK1P04629 796 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ITGB1P05556 798 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ERVK-10P10266 1014 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TNNI3P19429 210 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 POU1F1P28069 291 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 CD68P34810 354 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 STX5Q13190 355 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SKIV2LQ15477 1246 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ZNF181Q2M3W8 571 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 PARP15Q460N3 678 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 FBXO47Q5MNV8 452 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ZNF517Q6ZMY9 492 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ENOSF1Q7L5Y1 443 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 THAP5Q7Z6K1 395 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 DEFB128Q7Z7B8 93 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 C8orf59Q8N0T1 100 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 LNX2Q8N448 690 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TBC1D19Q8N5T2 526 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 OR4D10Q8NGI6 311 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ZFAND1Q8TCF1 268 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 USP7Q93009 1102 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 CPXM1Q96SM3 734 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 B3GNT5Q9BYG0 378 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.1□□□□□ -0.796e-11■■□□□ 13.7
SF3B2-201ENST00000322535 CYP4F12Q9HCS2 524 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 PNPLA8Q9NP80 782 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 HPF1Q9NWY4 346 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ERVK13-1Q9NX77 482 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SLC23A1Q9UHI7 598 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TMEM191CA6NGB0 347 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 FAM159BA6NKW6 160 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 NOBOXO60393 691 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TNFRSF21O75509 655 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SLC2A3P11169 496 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 PSMD5Q16401 504 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 RBM20Q5T481 1227 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ZBTB37Q5TC79 503 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ZNF767PQ75MW2 155 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 BEST2Q8NFU1 509 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 DYNC2LI1Q8TCX1 351 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 UTP15Q8TED0 518 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 FUBP1Q96AE4 644 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TMEM176AQ96HP8 235 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ITCHQ96J02 903 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SORBS1Q9BX66 1292 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 WNT5BQ9H1J7 359 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 RHBGQ9H310 441 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ZBTB20Q9HC78 741 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ATP6AP2A0A1C7CYW4 349 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 GATCO43716 136 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 CILPO75339 1184 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ATP6AP2O75787 350 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 MICAL2O94851 1124 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 PGLSO95336 258 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 RAB3AP20336 220 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 BRCC3P46736 316 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ARCN1P48444 511 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 DGKQP52824 942 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 NKX3-2P78367 333 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 PTPN11Q06124 597 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TRAF3Q13114 568 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 MADCAM1Q13477 382 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 TFDP2Q14188 446 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SSPNQ14714 243 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 BTBD16Q32M84 506 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 C5orf46Q6UWT4 87 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 HTR3DQ70Z44 454 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 RTN4RL1Q86UN2 441 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 RASGRP3Q8IV61 690 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 CCDC116Q8IYX3 515 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 PARP16Q8N5Y8 322 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 PIK3C3Q8NEB9 887 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 UFD1Q92890 307 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 MUL1Q969V5 352 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 AHCYL2Q96HN2 611 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 ARL5BQ96KC2 179 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 RNF145Q96MT1 663 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 FEM1AQ9BSK4 669 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SLIRPQ9GZT3 109 aaKnown RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 MMP28Q9H239 520 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 SMOC2Q9H3U7 446 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 MBD2Q9UBB5 411 aa10.1□□□□□ -0.79
SF3B2-201ENST00000322535 EVLQ9UI08 416 aaPredicted RBP10.1□□□□□ -0.79
SF3B2-201ENST00000322535 MYO7AQ13402 2215 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 LINC00862A6NCI5 91 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 KPNA7A9QM74 516 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 SMLR1H3BR10 107 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 B4GALT3O60512 393 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 LRIG2O94898 1065 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 F8A1P23610 371 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 KDELR1P24390 212 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 YBX1P67809 324 aaKnown RBP10.09□□□□□ -0.79
SF3B2-201ENST00000322535 CSNK2BP67870 215 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 EMX1Q04741 257 aaPredicted RBP10.09□□□□□ -0.79
SF3B2-201ENST00000322535 TAB1Q15750 504 aa10.09□□□□□ -0.79
SF3B2-201ENST00000322535 ZBTB6Q15916 424 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms