RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PLOD3O60568 738 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 CXCL14O95715 111 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 HTR6P50406 440 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 KCNAB2Q13303 367 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 GRM2Q14416 872 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 RAET1GQ6H3X3 334 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 HS3ST5Q8IZT8 346 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 HJURPQ8NCD3 748 aaPredicted RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 STON2Q8WXE9 905 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 NEK6Q9HC98 313 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 RNF186Q9NXI6 227 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 HSFX1Q9UBD0 423 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 PRR23D1E9PI22 279 aaPredicted RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 PRKD3O94806 890 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 PRR23D2P0DMB1 279 aaPredicted RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 STC1P52823 247 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 SERINC3Q13530 473 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 HIST2H2ACQ16777 129 aaPredicted RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 SPANXN4Q5MJ08 99 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 ZNF648Q5T619 568 aaPredicted RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 HIST2H2AA3Q6FI13 130 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 RANBP10Q6VN20 620 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 CHERPQ8IWX8 916 aaKnown RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 SLC15A3Q8IY34 581 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 SLC22A15Q8IZD6 547 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 OLAHQ9NV23 265 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 CLCA2Q9UQC9 943 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 TBC1D3BA6NDS4 549 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 GABRDO14764 452 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 ABCB7O75027 752 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 CSF2P04141 144 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 ARSFP54793 590 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 RAB15P59190 212 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 CHIT1Q13231 466 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 FAM214AQ32MH5 1076 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 CYP27C1Q4G0S4 372 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 PYDC2Q56P42 97 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 FAM91A1Q658Y4 838 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 BEND7Q8N7W2 519 aaPredicted RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 CYB5D2Q8WUJ1 264 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 TRUB1Q8WWH5 349 aaKnown RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 SCAMP4Q969E2 229 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 IMP4Q96G21 291 aaKnown RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 ZNF347Q96SE7 839 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 BOCQ9BWV1 1114 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 NPLQ9BXD5 320 aaPredicted RBP14.95□□□□□ -0.02
VARS2-201ENST00000321897 SIAEQ9HAT2 523 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 DYRK1BQ9Y463 629 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 PCDHB3Q9Y5E6 796 aa14.95□□□□□ -0.02
VARS2-201ENST00000321897 NRAPQ86VF7 1730 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 MBLAC1A4D2B0 266 aaPredicted RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 UROSP10746 265 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 HOXB8P17481 243 aaPredicted RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 POLR2EP19388 210 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 RGRP47804 291 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 CDH4P55283 916 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 RPS3AP61247 264 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 FAM180BQ6P0A1 224 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 CYP20A1Q6UW02 462 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 Q6ZVU0 165 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ISCA2Q86U28 154 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 PIANPQ8IYJ0 282 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 KBTBD8Q8NFY9 601 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ROPN1LQ96C74 230 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 TTYH2Q9BSA4 534 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 PTBP2Q9UKA9 531 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 ERGIC3Q9Y282 383 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 SLC9A8Q9Y2E8 581 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 PCDHGA7Q9Y5G6 932 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 CFAP20Q9Y6A4 193 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 ILVBLA1L0T0 632 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ACADVLP49748 655 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 CD300CQ08708 224 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ZSWIM7Q19AV6 140 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 INO80DQ53TQ3 878 aaPredicted RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 ZNF549Q6P9A3 640 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 Q6ZNX1 250 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ITIH5Q86UX2 942 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 YAF2Q8IY57 180 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 LEMD2Q8NC56 503 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ZNF420Q8TAQ5 688 aaPredicted RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 ZFP90Q8TF47 636 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 HDAC2Q92769 488 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 CDK5RAP1Q96SZ6 601 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 RBM4BQ9BQ04 359 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 RBM4Q9BWF3 364 aaKnown RBP14.94□□□□□ -0.02
VARS2-201ENST00000321897 SP140LQ9H930 580 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 UCKL1Q9NWZ5 548 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ACTR3BQ9P1U1 418 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 RAB23Q9ULC3 237 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ABCA3Q99758 1704 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 TRIP11Q15643 1979 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 PRSS51A0A1B0GVH4 220 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 NME4O00746 187 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 CA12O43570 354 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 VPS4BO75351 444 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 TSPAN19P0C672 248 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 IFNA8P32881 189 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ARHGAP15Q53QZ3 475 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 ADGRF1Q5T601 910 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms