RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 EFNA1P20827 205 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-201ENST00000320755 MAP4P27816 1152 aaKnown RBP17.01■□□□□ 0.31
COL9A1-201ENST00000320755 CCR7P32248 378 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 S100A3P33764 101 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 KRT6CP48668 564 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 PON2Q15165 354 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 TTLL9Q3SXZ7 439 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 TMEM179BQ7Z7N9 219 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 CMTM8Q8IZV2 173 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 DRAXINQ8NBI3 349 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-201ENST00000320755 CCDC90BQ9GZT6 254 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 DNAJB9Q9UBS3 223 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 WARS2Q9UGM6 360 aaKnown RBP17.01■□□□□ 0.31
COL9A1-201ENST00000320755 PDE10AQ9Y233 779 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 H0YAE9 185 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 IFRD1O00458 451 aaPredicted RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 GREM1O60565 184 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 NOL3O60936 208 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 WDR47O94967 919 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 IGSF6O95976 241 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 EBLN1P0CF75 366 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 SERPINA4P29622 427 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 GALNT5Q7Z7M9 940 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 APOLD1Q96LR9 279 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 COPS8Q99627 209 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 HTATIP2Q9BUP3 242 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 EBPLQ9BY08 206 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 DGCR6LQ9BY27 220 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 ZDHHC6Q9H6R6 413 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 FAM118AQ9NWS6 357 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 CREG1O75629 220 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF682O95780 498 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 AGXTP21549 392 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 RPS14P62263 151 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 KCNAB2Q13303 367 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 CDKN3Q16667 212 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 ZXDCQ2QGD7 858 aaPredicted RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 RUNDC3AQ59EK9 446 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 GRAMD4Q6IC98 578 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 MICU2Q8IYU8 434 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF555Q8NEP9 628 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 CCDC138Q96M89 665 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 AMBRA1Q9C0C7 1298 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 CLMPQ9H6B4 373 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 GORASP2Q9H8Y8 452 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 DNMT3BQ9UBC3 853 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 AASSQ9UDR5 926 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 INTS6Q9UL03 887 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 TRIM64A6NGJ6 449 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 MAN1A2O60476 641 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 PARNO95453 639 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 UGT2B4P06133 528 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 MSH3P20585 1137 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 CDKN2CP42773 168 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 DDX39BQ13838 428 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 USP39Q53GS9 565 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 MACC1Q6ZN28 852 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 PRR23BQ6ZRT6 265 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 VRK3Q8IV63 474 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 LEMD2Q8NC56 503 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 ABCB8Q9NUT2 735 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 SLC22A14Q9Y267 594 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 TDRKHQ9Y2W6 561 aaKnown RBP17■□□□□ 0.31
COL9A1-201ENST00000320755 INSL5Q9Y5Q6 135 aa17■□□□□ 0.31
COL9A1-201ENST00000320755 DOCK6Q96HP0 2047 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 GRXCR2A6NFK2 248 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF821O75541 412 aaPredicted RBP16.99■□□□□ 0.31
COL9A1-201ENST00000320755 SOD2P04179 222 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 GTF2H3Q13889 308 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 TRIM46Q7Z4K8 759 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 ZC3H7AQ8IWR0 971 aaKnown RBP16.99■□□□□ 0.31
COL9A1-201ENST00000320755 HS6ST3Q8IZP7 471 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 NTMT1Q9BV86 223 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 BBS2Q9BXC9 721 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 KAT8Q9H7Z6 458 aaKnown RBP16.99■□□□□ 0.31
COL9A1-201ENST00000320755 GPRC5BQ9NZH0 403 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 LSM7Q9UK45 103 aaKnown RBP16.99■□□□□ 0.31
COL9A1-201ENST00000320755 DIRAS1O95057 198 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 EPORP19235 508 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 NSG1P42857 185 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 B4GALNT1Q00973 533 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 SF1Q15637 639 aaKnown RBP16.99■□□□□ 0.31
COL9A1-201ENST00000320755 PTCHD3Q3KNS1 767 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 PLEKHG6Q3KR16 790 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 BROXQ5VW32 411 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF773Q6PK81 442 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 OR2AP1Q8NGE2 309 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 LHPPQ9H008 270 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 TMEM45AQ9NWC5 275 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 KCTD5Q9NXV2 234 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 STOML2Q9UJZ1 356 aa16.99■□□□□ 0.31
COL9A1-201ENST00000320755 TRBV5-4A0A0C4DH59 114 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 PABPN1LA6NDY0 278 aaKnown RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 HIST1H2AGP0C0S8 130 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 HIST1H2ADP20671 130 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 HALP42357 657 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 TPGS2Q68CL5 300 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 OR4F3Q6IEY1 312 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms