RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CLK4Q9HAZ1 481 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 VTI1BQ9UEU0 232 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 PCTPQ9UKL6 214 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 LTBP2Q14767 1821 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 H7C0S8 307 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 K7EPI3 171 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF197O14709 1029 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ELFN1P0C7U0 828 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 PDHA2P29803 388 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 RAB39AQ14964 217 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ABRAXAS2Q15018 415 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CARTPTQ16568 116 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CYP51A1Q16850 503 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 GRAMD4Q6IC98 578 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 TBPL2Q6SJ96 375 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 LARP4Q71RC2 724 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CPSF7Q8N684 471 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 OR4F6Q8NGB9 312 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 RHEBL1Q8TAI7 183 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ECHDC3Q96DC8 303 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 TIMMDC1Q9NPL8 285 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 INIPQ9NRY2 104 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 TRNAU1APQ9NX07 287 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 WWOXQ9NZC7 414 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 AASSQ9UDR5 926 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 GNPTGQ9UJJ9 305 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 MAFFQ9ULX9 164 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ANGPTL3Q9Y5C1 460 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CFAP20Q9Y6A4 193 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 NUMA1Q14980 2115 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 H3BMQ9 156 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 CLOCKO15516 846 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 TAPBPO15533 448 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 LATO43561 262 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 CISD3P0C7P0 127 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 IL7RP16871 459 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 ALDH3B2P48448 385 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 RPIAP49247 311 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 MLLT10P55197 1068 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 LSM3P62310 102 aaKnown RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 TXNL4AP83876 142 aaKnown RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF234Q14588 700 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 TMEM31Q5JXX7 168 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 PDE12Q6L8Q7 609 aaKnown RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 C16orf87Q6PH81 154 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 PIWIL3Q7Z3Z3 882 aaKnown RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 GOLGA7Q7Z5G4 137 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 GALNT7Q86SF2 657 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 GPR180Q86V85 440 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 RALGPS2Q86X27 583 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 CHPFQ8IZ52 775 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 HS3ST5Q8IZT8 346 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 FNDC5Q8NAU1 212 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 SMYD1Q8NB12 490 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 OR10Q1Q8NGQ4 319 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 ELMO1Q92556 727 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 SMARCD2Q92925 531 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 GFM2Q969S9 779 aaKnown RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 COG8Q96MW5 612 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 OSBPL6Q9BZF3 934 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 RETREG1Q9H6L5 497 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 MEAF6Q9HAF1 191 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 TMEM98Q9Y2Y6 226 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 DHRS12A0PJE2 317 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 SYCE1LA8MT33 242 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 C5orf67F2Z3F1 127 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 TSPAN6O43657 245 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 FUCA1P04066 466 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 C8BP07358 591 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 HNRNPA1P09651 372 aaKnown RBP eCLIP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 MAPK8P45983 427 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 HK2P52789 917 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 ATP6V0D1P61421 351 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 UFM1P61960 85 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 CRY1Q16526 586 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 IMPG1Q17R60 797 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 RFTN2Q52LD8 501 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 PERM1Q5SV97 790 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 CRTC3Q6UUV7 619 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 VITQ6UXI7 678 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 CERS6Q6ZMG9 384 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 GPRIN3Q6ZVF9 776 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 KCTD8Q6ZWB6 473 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 MILR1Q7Z6M3 343 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 OR2T34Q8NGX1 318 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 OR2T3Q8NH03 318 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 TANKQ92844 425 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 AP2M1Q96CW1 435 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 MED8Q96G25 268 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 ITCHQ96J02 903 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 P2RY13Q9BPV8 354 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 DGCR6LQ9BY27 220 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 HPS4Q9NQG7 708 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 MAP10Q9P2G4 905 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 SUCOQ9UBS9 1254 aaKnown RBP7.43□□□□□ -1.22
TRIM55-202ENST00000315962 KLQ9UEF7 1012 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 SUN2Q9UH99 717 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 BCAP29Q9UHQ4 241 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 VPS9D1Q9Y2B5 631 aa7.43□□□□□ -1.22
TRIM55-202ENST00000315962 WDFY3Q8IZQ1 3526 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms