RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 SH3PXD2AQ5TCZ1 1133 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 HACD4Q5VWC8 232 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 C1orf186Q6ZWK4 172 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 PTAR1Q7Z6K3 402 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ZNF101Q8IZC7 436 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 TFGQ92734 400 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ELOVL1Q9BW60 279 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 FUNDC2Q9BWH2 189 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CLK4Q9HAZ1 481 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CTPS2Q9NRF8 586 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 RLIMQ9NVW2 624 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 RCOR3Q9P2K3 495 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 GLS2Q9UI32 602 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 A0A1W2PPK0 400 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 RAB29O14966 203 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SLC19A2O60779 497 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 HRGP04196 525 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 IFNGR1P15260 489 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 AKR1C4P17516 323 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CSNK2A2P19784 350 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 AOAHP28039 575 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 FASLGP48023 281 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 RBM11P57052 281 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ARF6P62330 175 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 NKX1-1Q15270 411 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 METAP1DQ6UB28 335 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 HIST2H3AQ71DI3 136 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 MRPL10Q7Z7H8 261 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SYT12Q8IV01 421 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ADGRF2Q8IZF7 708 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ALLCQ8N6M5 410 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 C8orf58Q8NAV2 365 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SUMF2Q8NBJ7 301 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 HSD17B11Q8NBQ5 300 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ANKRD7Q92527 254 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 NELL1Q92832 810 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 WACQ9BTA9 647 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 PPIL3Q9H2H8 161 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CD320Q9NPF0 282 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ZNF256Q9Y2P7 627 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 TULP2O00295 520 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ENDOD1O94919 500 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 DIRAS1O95057 198 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 UNC5CO95185 931 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 MT-CO2P00403 227 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ADH6P28332 368 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 DGKGP49619 791 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 AKR1C2P52895 323 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CSHL1Q14406 222 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 PON3Q15166 354 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ODF4Q2M2E3 257 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 TUSC1Q2TAM9 212 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SLC36A3Q495N2 470 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CCNJQ5T5M9 372 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 OR52W1Q6IF63 320 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 PPP1R3BQ86XI6 285 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 TUSC5Q8IXB3 177 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 DENND1AQ8TEH3 1009 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ZKSCAN4Q969J2 545 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 MED18Q9BUE0 208 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 IPPKQ9H8X2 491 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 EQTNQ9NQ60 294 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CHRNA9Q9UGM1 479 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 FAM96BQ9Y3D0 163 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ABCC10Q5T3U5 1492 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SH2B2O14492 632 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 PSMG1O95456 288 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 CTSKP43235 329 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 UBE2G2P60604 165 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SNTA1Q13424 505 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 GPR68Q15743 365 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 NEPROQ6NW34 567 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SLC24A4Q8NFF2 622 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 OR14L1PQ8NHC6 308 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 AKR7LQ8NHP1 331 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ACMSDQ8TDX5 336 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SLC22A17Q8WUG5 538 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 MAGEB18Q96M61 343 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 OR11A1Q9GZK7 315 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ERCC6Q03468 1493 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 A0A087WZY1 265 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 SERTM2A0A1B0GWG4 89 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ILVBLA1L0T0 632 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 YKT6O15498 198 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ADAM12O43184 909 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 LRRTM2O43300 516 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 GPRIN2O60269 458 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 MYBL2P10244 700 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ATP5A1P25705 553 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 TTI2Q6NXR4 508 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 PAOXQ6QHF9 649 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ZER1Q7Z7L7 766 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 ZSCAN4Q8NAM6 433 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 OR10A6Q8NH74 314 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 INTS14Q96SY0 518 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 DCSTAMPQ9H295 470 aa7.51□□□□□ -1.21
LIMCH1-201ENST00000313860 UMODL1Q5DID0 1318 aa7.5□□□□□ -1.21
LIMCH1-201ENST00000313860 OR10H2O60403 315 aa7.5□□□□□ -1.21
LIMCH1-201ENST00000313860 CNIH1O95406 144 aa7.5□□□□□ -1.21
LIMCH1-201ENST00000313860 GLP2RO95838 553 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms