RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 CPNE6O95741 557 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 SPARTQ8N0X7 666 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 LEMD2Q8NC56 503 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 ZNF461Q8TAF7 563 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 CD99L2Q8TCZ2 262 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 CCDC115Q96NT0 180 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 BEGAINQ9BUH8 593 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 C1orf109Q9NX04 203 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 WARS2Q9UGM6 360 aaKnown RBP24.75■■□□□ 1.55
HOXB3-201ENST00000311626 CIDEBQ9UHD4 219 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 DGKBQ9Y6T7 804 aa24.75■■□□□ 1.55
HOXB3-201ENST00000311626 PRRC2BQ5JSZ5 2229 aaKnown RBP24.75■■□□□ 1.55
HOXB3-201ENST00000311626 IFRD1O00458 451 aaPredicted RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 DIRAS1O95057 198 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 RPS3P23396 243 aaKnown RBP eCLIP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 FSHRP23945 695 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 MLLT10P55197 1068 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 SP3Q02447 781 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 HSPA14Q0VDF9 509 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 GIPC3Q8TF64 312 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 FAM120BQ96EK7 910 aaKnown RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 CCDC90BQ9GZT6 254 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 RETREG1Q9H6L5 497 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 KAT8Q9H7Z6 458 aaKnown RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 CD84Q9UIB8 345 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 SH3PXD2BA1X283 911 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 NOL3O60936 208 aaKnown RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 AOC2O75106 756 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 CYP4B1P13584 511 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 EFNA1P20827 205 aaPredicted RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 RPIAP49247 311 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 PPP2R2BQ00005 443 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 C6orf141Q5SZD1 244 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 PRR23BQ6ZRT6 265 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 ZNF551Q7Z340 670 aaPredicted RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 HJURPQ8NCD3 748 aaPredicted RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 ZNF555Q8NEP9 628 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 SELENOMQ8WWX9 145 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 OVCA2Q8WZ82 227 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 YTHDF1Q9BYJ9 559 aaKnown RBP24.74■■□□□ 1.55
HOXB3-201ENST00000311626 PARVBQ9HBI1 364 aa24.74■■□□□ 1.55
HOXB3-201ENST00000311626 GREM1O60565 184 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 MTX2O75431 263 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 PARNO95453 639 aaKnown RBP24.73■■□□□ 1.55
HOXB3-201ENST00000311626 IL6P05231 212 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CCNA2P20248 432 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CCR7P32248 378 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CD70P32970 193 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 PLA2G16P53816 162 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 AP1S1P61966 158 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CYP4F8P98187 520 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 SF1Q15637 639 aaKnown RBP24.73■■□□□ 1.55
HOXB3-201ENST00000311626 SPOUT1Q5T280 376 aaKnown RBP24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CES5AQ6NT32 575 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 TRIM46Q7Z4K8 759 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CRIPAKQ8N1N5 446 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 NXPE1Q8N323 547 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 PARP8Q8N3A8 854 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 SLC43A3Q8NBI5 491 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CNIH3Q8TBE1 160 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 EBPLQ9BY08 206 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 TMEM45AQ9NWC5 275 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 PPT2Q9UMR5 302 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 SCN5AQ14524 2016 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 A0A1W2PQ67 120 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 XPNPEP2O43895 674 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 ABCB7O75027 752 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 ZBTB11O95625 1053 aaPredicted RBP24.73■■□□□ 1.55
HOXB3-201ENST00000311626 TTKP33981 857 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 DCTP40126 519 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 VRK3Q8IV63 474 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 MYOCQ99972 504 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 SERHLQ9NQF3 203 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 PDE10AQ9Y233 779 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 CORINQ9Y5Q5 1042 aa24.73■■□□□ 1.55
HOXB3-201ENST00000311626 SH3BGRLO75368 114 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 SEC14L2O76054 403 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 CLDN9O95484 217 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 EBLN1P0CF75 366 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 RPS14P62263 151 aaKnown RBP24.72■■□□□ 1.55
HOXB3-201ENST00000311626 B4GALNT1Q00973 533 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 DPY19L1Q2PZI1 675 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 ATP13A5Q4VNC0 1218 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 RAET1EQ8TD07 263 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 APIPQ96GX9 242 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 TMEM175Q9BSA9 504 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 NTMT1Q9BV86 223 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 DCAF13Q9NV06 445 aaKnown RBP24.72■■□□□ 1.55
HOXB3-201ENST00000311626 PAK1IP1Q9NWT1 392 aaPredicted RBP24.72■■□□□ 1.55
HOXB3-201ENST00000311626 DNMT3BQ9UBC3 853 aaKnown RBP24.72■■□□□ 1.55
HOXB3-201ENST00000311626 ZNF821O75541 412 aaPredicted RBP24.72■■□□□ 1.55
HOXB3-201ENST00000311626 ZNF682O95780 498 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 HNRNPCP07910 306 aaKnown RBP eCLIP24.72■■□□□ 1.55
HOXB3-201ENST00000311626 GJA1P17302 382 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 MSH3P20585 1137 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 ITPKAP23677 461 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 S100A3P33764 101 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 SPAM1P38567 509 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 BMXP51813 675 aa24.72■■□□□ 1.55
HOXB3-201ENST00000311626 CRTC1Q6UUV9 634 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms