RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 DMRTB1Q96MA1 342 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 FERD3LQ96RJ6 166 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 ELL3Q9HB65 397 aaPredicted RBP12.92□□□□□ -0.34
SNED1-201ENST00000310397 PDCD5O14737 125 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 DLX3O60479 287 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 XKRXQ6PP77 449 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 CPNE8Q86YQ8 564 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 GOLM1Q8NBJ4 401 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 OR10G2Q8NGC3 310 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 SLC39A3Q9BRY0 314 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 ACAT2Q9BWD1 397 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 MAT2BQ9NZL9 334 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 SH3PXD2BA1X283 911 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 GPALPP1Q8IXQ4 340 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 FZD8Q9H461 694 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 ISM1B1AKI9 464 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 DENRO43583 198 aaKnown RBP12.92□□□□□ -0.34
SNED1-201ENST00000310397 XKP51811 444 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 NFKB2Q00653 900 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 TARDBPQ13148 414 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNED1-201ENST00000310397 TAC4Q86UU9 113 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 MND1Q9BWT6 205 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 GRIP1Q9Y3R0 1128 aa12.92□□□□□ -0.34
SNED1-201ENST00000310397 OR6C70A6NIJ9 312 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 HTRA2O43464 458 aaPredicted RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 CBX5P45973 191 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 CSTF1Q05048 431 aaKnown RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 FBXO48Q5FWF7 155 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 EBPLQ9BY08 206 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 USP29Q9HBJ7 922 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 XPNPEP1Q9NQW7 623 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 MLXQ9UH92 298 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 TBC1D24Q9ULP9 559 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 CLEC4AQ9UMR7 237 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 PRELID1Q9Y255 219 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 TLR6Q9Y2C9 796 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 CSTF2P33240 577 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNED1-201ENST00000310397 RAPSNQ13702 412 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 TARBP2Q15633 366 aaKnown RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 SF1Q15637 639 aaKnown RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 SPIN4Q56A73 249 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 SDHAF4Q5VUM1 108 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 JAZF1Q86VZ6 243 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 CLIP4Q8N3C7 705 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 ZNF599Q96NL3 588 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 YJEFN3A6XGL0 299 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 SYN3O14994 580 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 FGF19O95750 216 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 DNTTP04053 509 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 POU2F1P14859 743 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 PPM1AP35813 382 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 KIAA1614Q5VZ46 1190 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 ANKRD23Q86SG2 305 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 OR6K2Q8NGY2 324 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 PLD4Q96BZ4 506 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 ZNF536O15090 1300 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 ADAM8P78325 824 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 WSCD2Q2TBF2 565 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 EIPR1Q53HC9 387 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 SPAG16Q8N0X2 631 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 SIDT2Q8NBJ9 832 aaKnown RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 FNDC8Q8TC99 324 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 KBTBD7Q8WVZ9 684 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 PRORSD1PA6NEY8 169 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 INMTO95050 263 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 ADH1CP00326 375 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 CLCNKBP51801 687 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 ZNF613Q6PF04 617 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 LBX2Q6XYB7 198 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 SNX20Q7Z614 316 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 CCDC106Q9BWC9 280 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 COMMD4Q9H0A8 199 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 ZNF696Q9H7X3 374 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 SPATA7Q9P0W8 599 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 LINGO3P0C6S8 592 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 PGBD2Q6P3X8 592 aa12.91□□□□□ -0.34
SNED1-201ENST00000310397 SAMD14Q8IZD0 417 aaPredicted RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 EFHD2Q96C19 240 aaPredicted RBP12.91□□□□□ -0.34
SNED1-201ENST00000310397 ADH1AP07327 375 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 HOXD13P35453 343 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 CDK14O94921 469 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 TBC1D14Q9P2M4 693 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
SNED1-201ENST00000310397 GPSM3Q9Y4H4 160 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 LCHNA4D1U4 455 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 NEMP2A6NFY4 417 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 ADM5C9JUS6 153 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 HCN1O60741 890 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 LSAMPQ13449 338 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 PAFAH1B3Q15102 231 aaKnown RBP12.9□□□□□ -0.34
SNED1-201ENST00000310397 SYT16Q17RD7 645 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 MSANTD2Q6P1R3 559 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms