RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MTERF1Q99551 399 aaKnown RBP11.28□□□□□ -0.6
PTPN2-201ENST00000309660 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 OGDHLQ9ULD0 1010 aa11.28□□□□□ -0.6
PTPN2-201ENST00000309660 UNC80Q8N2C7 3258 aa11.27□□□□□ -0.6
PTPN2-201ENST00000309660 ABHD14A-ACY1A0A1B0GW23 586 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 HIDE1A8MVS5 230 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 PRKD3O94806 890 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 POP4O95707 220 aaKnown RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 CST1P01037 141 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 CLTBP09497 229 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 CDH2P19022 906 aaPredicted RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 RPS14P62263 151 aaKnown RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 MAD2L1Q13257 205 aaPredicted RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 GALNT10Q86SR1 603 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF689Q96CS4 500 aaPredicted RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 P2RY13Q9BPV8 354 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 INPP5KQ9BT40 448 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 SMURF2Q9HAU4 748 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 PTTG2Q9NZH5 202 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 SLC8A2Q9UPR5 921 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 CCL27Q9Y4X3 112 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 PCDHB3Q9Y5E6 796 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 GFRA2O00451 464 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 ADH1AP07327 375 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 CDH1P12830 882 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 PRKACGP22612 351 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 CALRP27797 417 aaKnown RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 SLC5A2P31639 672 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 SPINT3P49223 89 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 SLC7A9P82251 487 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 LRRC23Q53EV4 343 aaPredicted RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 ANKRD34AQ69YU3 496 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 GPR141Q7Z602 305 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 DPP10Q8N608 796 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 SEZ6LQ9BYH1 1024 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 MUC13Q9H3R2 512 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 CARS2Q9HA77 564 aaKnown RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 SLC25A37Q9NYZ2 338 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 RSL24D1Q9UHA3 163 aaKnown RBP11.27□□□□□ -0.61
PTPN2-201ENST00000309660 HCFC2Q9Y5Z7 792 aa11.27□□□□□ -0.61
PTPN2-201ENST00000309660 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ELOVL7A1L3X0 281 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 TMEM202A6NGA9 273 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 TTC34A8MYJ7 566 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 LEFTY1O75610 366 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF682O95780 498 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 UMPSP11172 480 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 TCF3P15923 654 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ELK4P28324 431 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CAPGP40121 348 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 PREPP48147 710 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 VAC14Q08AM6 782 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 FOXD4Q12950 439 aaPredicted RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CHIT1Q13231 466 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 LAPTM4AQ15012 233 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ZXDCQ2QGD7 858 aaPredicted RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 SYTL3Q4VX76 610 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ANKRD26P1Q6NSI1 321 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 NEK5Q6P3R8 708 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 GDPD4Q6W3E5 623 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ZDHHC13Q8IUH4 622 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 LILRA3Q8N6C8 439 aaPredicted RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 LMNTD1Q8N9Z9 388 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 MFSD2AQ8NA29 543 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 APIPQ96GX9 242 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 MUS81Q96NY9 551 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 FAM83DQ9H4H8 585 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ZNF510Q9Y2H8 683 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CEPT1Q9Y6K0 416 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CHD7Q9P2D1 2997 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 GBF1Q92538 1859 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 A0A087WXM4 84 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 DYTNA2CJ06 578 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ATP1B2P14415 290 aaPredicted RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 MSH3P20585 1137 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 PPM1AP35813 382 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 IRF8Q02556 426 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 SLC36A3Q495N2 470 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 OR4F3Q6IEY1 312 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 ABRAXAS1Q6UWZ7 409 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CCDC149Q6ZUS6 474 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 HSD11B1LQ7Z5J1 315 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CPXM2Q8N436 756 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 PACRGLQ8N7B6 248 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 MCOLN3Q8TDD5 553 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 NCSTNQ92542 709 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 PAWRQ96IZ0 340 aaKnown RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 RIOK2Q9BVS4 552 aaKnown RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 RBM38Q9H0Z9 239 aaKnown RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 OCEL1Q9H607 264 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 POLR1BQ9H9Y6 1135 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 PCDHB14Q9Y5E9 798 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CXCR6O00574 342 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 TRMUO75648 421 aaKnown RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 CPSF4O95639 269 aaKnown RBP11.26□□□□□ -0.61
PTPN2-201ENST00000309660 RAP2AP10114 183 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 GGT1P19440 569 aa11.26□□□□□ -0.61
PTPN2-201ENST00000309660 MAP4P27816 1152 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms