RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 NTRK1P04629 796 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 HLA-DPA1P20036 260 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 DDX39BQ13838 428 aaKnown RBP14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 DEPDC1Q5TB30 811 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 AGAP7PQ5VUJ5 663 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 ZNF691Q5VV52 312 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 DESI1Q6ICB0 168 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 OR52J3Q8NH60 311 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 CNDP2Q96KP4 475 aaKnown RBP14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 NUSAP1Q9BXS6 441 aaKnown RBP14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 ANKMY1Q9P2S6 941 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 BOLA1Q9Y3E2 137 aa14.09□□□□□ -0.15
SCUBE2-201ENST00000309263 M0R129 80 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 TPD52L2O43399 206 aaKnown RBP14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 RHOQP17081 205 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 AZGP1P25311 298 aaKnown RBP14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 RGRP47804 291 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 MASP1P48740 699 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 CRYBB1P53674 252 aaPredicted RBP14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 DMC1Q14565 340 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 STEAP3Q658P3 488 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 DOK6Q6PKX4 331 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 CCDC117Q8IWD4 279 aaPredicted RBP14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 TTC9BQ8N6N2 239 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 SETD9Q8NE22 299 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 ZNF548Q8NEK5 533 aaPredicted RBP14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 INPP5KQ9BT40 448 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 OTOFQ9HC10 1997 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 MYLKQ15746 1914 aa14.08□□□□□ -0.15
SCUBE2-201ENST00000309263 S100A1P23297 94 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 XKR7Q5GH72 579 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 RGMBQ6NW40 437 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 ZNF621Q6ZSS3 439 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 SVOPLQ8N434 492 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 TSPEARQ8WU66 669 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 ATL1Q8WXF7 558 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 GTF2H4Q92759 462 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 PYCR2Q96C36 320 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 MYEOVQ96EZ4 313 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 SEPT5Q99719 369 aaPredicted RBP14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 APOL4Q9BPW4 351 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 CEP44Q9C0F1 390 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 MARCH2Q9P0N8 246 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 DNMT3BQ9UBC3 853 aaKnown RBP14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 PAPPA2Q9BXP8 1791 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 GABARAPO95166 117 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 C1QCP02747 245 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 SPNP16150 400 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 CARD16Q5EG05 197 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 UBE2J2Q8N2K1 259 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 MFSD4AQ8N468 514 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 BRI3BPQ8WY22 251 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 FBXO32Q969P5 355 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 KCNS3Q9BQ31 491 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 DPH2Q9BQC3 489 aaPredicted RBP14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 ACBD6Q9BR61 282 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 TRIM62Q9BVG3 475 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 SLC25A37Q9NYZ2 338 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 MED16Q9Y2X0 877 aa14.08□□□□□ -0.16
SCUBE2-201ENST00000309263 PDZK1P1A8MUH7 402 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 PCMT1P22061 227 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 S100A3P33764 101 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 KCNC2Q96PR1 638 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 NOX1Q9Y5S8 564 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 IDH3BO43837 385 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 RFPL2O75678 378 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 NDST3O95803 873 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 POU2F1P14859 743 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 SETMARQ53H47 684 aaPredicted RBP14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 AFTPHQ6ULP2 937 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 FAM151BQ6UXP7 276 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 AGMOQ6ZNB7 445 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 C16orf59Q7L2K0 433 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 GPR142Q7Z601 462 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 HIPK1Q86Z02 1210 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 CELF2-AS1Q8N7Q2 184 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 ATP6V0D2Q8N8Y2 350 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 KLHDC9Q8NEP7 349 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 MDGA1Q8NFP4 955 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 Q96MT0 163 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 GPR63Q9BZJ6 419 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 CIPCQ9C0C6 399 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 AP5M1Q9H0R1 490 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 PBX3P40426 434 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 PPP5CP53041 499 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 ZNF404Q494X3 552 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 MANEALQ5VSG8 457 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 LAIR1Q6GTX8 287 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 CCBE1Q6UXH8 406 aaPredicted RBP14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 NPLOC4Q8TAT6 608 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 MS4A4AQ96JQ5 239 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 EBPLQ9BY08 206 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 RMND5AQ9H871 391 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 NEK6Q9HC98 313 aa14.07□□□□□ -0.16
SCUBE2-201ENST00000309263 RGS14O43566 566 aa14.06□□□□□ -0.16
SCUBE2-201ENST00000309263 GLUD1P00367 558 aa14.06□□□□□ -0.16
SCUBE2-201ENST00000309263 APOA1P02647 267 aa14.06□□□□□ -0.16
SCUBE2-201ENST00000309263 TSTA3Q13630 321 aaPredicted RBP14.06□□□□□ -0.16
SCUBE2-201ENST00000309263 UPP1Q16831 310 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms