RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 A0A0A6YYH2 397 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 A6NJ64 397 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 SLC22A1O15245 554 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 IFNA1P01562 189 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ANXA4P09525 319 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 MAMLD1Q13495 774 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 OR10A6Q8NH74 314 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 TGDSO95455 350 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 INSRRP14616 1297 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 F8A1P23610 371 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 PTGR1Q14914 329 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 C12orf45Q8N5I9 185 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 PTTG2Q9NZH5 202 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 H3BUI4 141 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 M0QX08 132 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 IL33O95760 270 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 IFNA5P01569 189 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 HDCP19113 662 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 MERTKQ12866 999 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 KANK2Q63ZY3 851 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 S100A16Q96FQ6 103 aaKnown RBP13.17□□□□□ -0.3
TRIM56-201ENST00000306085 NEDD4LQ96PU5 975 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 TMEM246Q9BRR3 403 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 DEFB129Q9H1M3 183 aa13.17□□□□□ -0.3
TRIM56-201ENST00000306085 H3BRB1 525 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ADH1CP00326 375 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 PON2Q15165 354 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 WSCD1Q658N2 575 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 SCP2D1Q9UJQ7 156 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 TSTD3H0UI37 97 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 GOT1P17174 413 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 RPL35P42766 123 aaKnown RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 FASTKD3Q14CZ7 662 aaKnown RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 NKAPLQ5M9Q1 402 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 NFASCO94856 1347 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 USP42Q9H9J4 1324 aaKnown RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 CALCAP01258 141 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 TGFB3P10600 412 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 SLC15A1P46059 708 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 PON3Q15166 354 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ZACNQ401N2 412 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 CMC1Q7Z7K0 106 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 SLC9B2Q86UD5 537 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ZDHHC21Q8IVQ6 265 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 BEND7Q8N7W2 519 aaPredicted RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 TMEM45AQ9NWC5 275 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 LIASO43766 372 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 VIPP01282 170 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 IFNGR1P15260 489 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 LIN52Q52LA3 116 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ATAT1Q5SQI0 421 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 RHBDF2Q6PJF5 856 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ANKS1BQ7Z6G8 1248 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 TMEM41AQ96HV5 264 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 WRAP53Q9BUR4 548 aaKnown RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 EIF2B4Q9UI10 523 aaKnown RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 TCRBV9S1A1TA0A576 114 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 FOXM1Q08050 763 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 CHST9Q7L1S5 443 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 TMED5Q9Y3A6 229 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 SMIM30A4D0T7 59 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ANKRD33BA6NCL7 494 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 APOC3P02656 99 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 CYP3A5P20815 502 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 LDAHQ9H6V9 325 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 CTPS2Q9NRF8 586 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 FAM205AQ6ZU69 1335 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ILVBLA1L0T0 632 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 J3QRK9 145 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ALPPP05187 535 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 RTP1P59025 263 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 AUHQ13825 339 aaKnown RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 WDR55Q9H6Y2 383 aaPredicted RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 OIP5O43482 229 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 RECQL4O94761 1208 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 CCND3P30281 292 aaPredicted RBP13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF527Q8NB42 609 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 C3orf58Q8NDZ4 430 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 UPF1Q92900 1129 aaKnown RBP eCLIP13.16□□□□□ -0.31e-10■■■■■ 32
TRIM56-201ENST00000306085 LGMNQ99538 433 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 J3QLW9 94 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 PLD2O14939 933 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF19P17023 458 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 RNF151Q2KHN1 245 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 OR14A2Q96R54 314 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 SLC17A7Q9P2U7 560 aa13.16□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF705GA8MUZ8 300 aaPredicted RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 CYP3A4P08684 503 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 PLGLB1Q02325 96 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 ECH1Q13011 328 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 EIF2B1Q14232 305 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms